AtubingensisCBS134.48 Aspergillus tubingensis CBS 134.48

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, KV878204:2572551-2594161

MATPredictFungiDBCOX13 (flanking_conserved) KV878204:2572551-2573273 - identity 79.4COX13APN2 (flanking_conserved) KV878204:2573792-2575928 + identity 90.9APN2MAT1-1-1 (core_MAT) KV878204:2578182-2579339 + identity 51.4MAT1-1-1SLA2 (flanking_conserved) KV878204:2590356-2594161 - identity 88.8SLA2ASPTUDRAFT_44741 2568506-2569032 +: hypothetical proteinASPTUDRAFT_44741ASPTUDRAFT_717678 2569464-2572282 +: Anaphase-promoting complex subunit 5 | domain-containing proteinASPTUDRAFT_717678ASPTUDRAFT_174406 2572447-2573292 -: Cytochrome c oxidase subunit VIa | domain-containing proteinASPTUDRAFT_174406ASPTUDRAFT_44744 2573568-2575965 +: DNA-(apurinic or apyrimidinic site) endonuclease 2ASPTUDRAFT_44744ASPTUDRAFT_124452 2578182-2579339 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinASPTUDRAFT_124452ASPTUDRAFT_191828 2582648-2584028 +: WD domain, G-beta repeat | domain-containing proteinASPTUDRAFT_191828ASPTUDRAFT_44747 2584181-2586030 -: aldehyde dehydrogenase (NAD+)ASPTUDRAFT_44747ASPTUDRAFT_123066 2586393-2587856 +: CoA-transferase family III | domain-containing proteinASPTUDRAFT_123066ASPTUDRAFT_191831 2588318-2589971 +: hypothetical proteinASPTUDRAFT_191831ASPTUDRAFT_67364 2590356-2594551 -: ANTH domain | I/LWEQ domain | domain-containing proteinASPTUDRAFT_67364ASPTUDRAFT_44751 2594744-2597414 -: Pleckstrin homology domain | Maintenance of mitochondrial morphology protein 1 | domain-containing proteinASPTUDRAFT_447512568 kb2572 kb2576 kb2580 kb2584 kb2588 kb2592 kb2596 kbKV878204
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved2572551-2573273 -annotatedASPTUDRAFT_174406Cytochrome c oxidase subunit VIa | domain-containing proteinASPTUDRAFT_174406 covers 100% of it on the same strand
APN2flanking_conserved2573792-2575928 +annotatedASPTUDRAFT_44744DNA-(apurinic or apyrimidinic site) endonuclease 2ASPTUDRAFT_44744 covers 100% of it on the same strand
MAT1-1-1core_MAT2578182-2579339 +annotatedASPTUDRAFT_124452Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinASPTUDRAFT_124452 covers 100% of it on the same strand
SLA2flanking_conserved2590356-2594161 -annotatedASPTUDRAFT_67364ANTH domain | I/LWEQ domain | domain-containing proteinASPTUDRAFT_67364 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
ASPTUDRAFT_1918282582648-2584028 +WD domain, G-beta repeat | domain-containing protein
ASPTUDRAFT_447472584181-2586030 -aldehyde dehydrogenase (NAD+)
ASPTUDRAFT_1230662586393-2587856 +CoA-transferase family III | domain-containing protein
ASPTUDRAFT_1918312588318-2589971 +hypothetical protein