AluchuensisCBS106.47 Aspergillus luchuensis CBS 106.47

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, KV878237:3343431-3364238

MATPredictFungiDBCOX13 (flanking_conserved) KV878237:3343431-3344023 - identity 77.2COX13APN2 (flanking_conserved) KV878237:3344579-3346716 + identity 90.9APN2MAT1-1-1 (core_MAT) KV878237:3348958-3350115 + identity 51.2MAT1-1-1SLA2 (flanking_conserved) KV878237:3360429-3364238 - identity 89.5SLA2ASPFODRAFT_41811 3337922-3338853 +: hypothetical proteinASPFODRAFT_41811ASPFODRAFT_41813 3340029-3343345 +: Anaphase-promoting complex subunit 5 | domain-containing proteinASPFODRAFT_41813ASPFODRAFT_41814 3343259-3344052 -: Cytochrome c oxidase subunit VIa | domain-containing proteinASPFODRAFT_41814ASPFODRAFT_123916 3344579-3346716 +: DNA-(apurinic or apyrimidinic site) endonuclease 2ASPFODRAFT_123916ASPFODRAFT_180958 3348934-3350143 +: Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinASPFODRAFT_180958ASPFODRAFT_57556 3352726-3354105 +: WD domain, G-beta repeat | domain-containing proteinASPFODRAFT_57556ASPFODRAFT_41818 3354294-3355962 -: aldehyde dehydrogenase (NAD+)ASPFODRAFT_41818ASPFODRAFT_41819 3356092-3358072 +: CoA-transferase family III | domain-containing proteinASPFODRAFT_41819ASPFODRAFT_41821 3358186-3360502 +: hypothetical proteinASPFODRAFT_41821ASPFODRAFT_203824 3360429-3364238 -: ANTH domain | I/LWEQ domain | domain-containing proteinASPFODRAFT_203824ASPFODRAFT_41823 3364824-3368379 -: Pleckstrin homology domain | Maintenance of mitochondrial morphology protein 1 | domain-containing proteinASPFODRAFT_418233340 kb3344 kb3348 kb3352 kb3356 kb3360 kb3364 kb3368 kbKV878237
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved3343431-3344023 -annotatedASPFODRAFT_41814Cytochrome c oxidase subunit VIa | domain-containing proteinASPFODRAFT_41814 covers 100% of it on the same strand
APN2flanking_conserved3344579-3346716 +annotatedASPFODRAFT_123916DNA-(apurinic or apyrimidinic site) endonuclease 2ASPFODRAFT_123916 covers 100% of it on the same strand
MAT1-1-1core_MAT3348958-3350115 +annotatedASPFODRAFT_180958Mating-type protein MAT alpha 1 HMG-box | domain-containing proteinASPFODRAFT_180958 covers 100% of it on the same strand
SLA2flanking_conserved3360429-3364238 -annotatedASPFODRAFT_203824ANTH domain | I/LWEQ domain | domain-containing proteinASPFODRAFT_203824 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
ASPFODRAFT_575563352726-3354105 +WD domain, G-beta repeat | domain-containing protein
ASPFODRAFT_418183354294-3355962 -aldehyde dehydrogenase (NAD+)
ASPFODRAFT_418193356092-3358072 +CoA-transferase family III | domain-containing protein
ASPFODRAFT_418213358186-3360502 +hypothetical protein