AfijiensisCBS313.89 Aspergillus fijiensis CBS 313.89
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, KZ824647:277896-322503
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| MAT1-1-2 | core_MAT | 277896-278168 + | partial | BO72DRAFT_127028 | mediator of RNA polymerase II transcription subunit 12 | BO72DRAFT_127028 overlaps only 42% of it |
| COX13 | flanking_conserved | 298918-299780 - | annotated | BO72DRAFT_405513 | mitochondrial cytochrome c oxidase subunit VIa | BO72DRAFT_405513 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 300193-302351 + | annotated | BO72DRAFT_486580 | DNA lyase Apn2 | BO72DRAFT_486580 covers 100% of it on the same strand |
| MAT1-2-1 | core_MAT | 303617-304682 - | annotated | BO72DRAFT_405520 | mating-type HMG-box protein MAT1-2 | BO72DRAFT_405520 covers 100% of it on the same strand |
| MAT1-2-4 | core_MAT | 305232-306059 + | annotated | BO72DRAFT_405521 | putative mating locus protein | BO72DRAFT_405521 covers 100% of it on the same strand |
| CIMG_00407 | core_MAT | 305457-305717 + | annotated | BO72DRAFT_405521 | putative mating locus protein | BO72DRAFT_405521 covers 100% of it on the same strand |
| SLA2 | flanking_conserved | 318641-322503 - | annotated | BO72DRAFT_486585 | cytoskeleton assembly control protein Sla2 | BO72DRAFT_486585 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| BO72DRAFT_486573 | 283745-285319 + | CIA30-domain-containing protein |
| BO72DRAFT_448691 | 285386-286687 - | SAICAR synthetase |
| BO72DRAFT_448693 | 286840-288904 - | D-xylose reductase [NAD(P)H] |
| BO72DRAFT_448694 | 291211-292016 - | unspecified product |
| BO72DRAFT_430417 | 292798-294657 + | alpha/beta-hydrolase |
| BO72DRAFT_448695 | 295315-298562 + | putative anaphase-promoting complex subunit Apc5 |
| BO72DRAFT_448699 | 309496-311124 + | metal dependent phosphohydrolase |
| BO72DRAFT_448700 | 311055-312844 - | putative aldehyde dehydrogenase family protein |
| BO72DRAFT_127623 | 312965-315129 + | CAIB/BAIF family enzyme |
| BO72DRAFT_469111 | 315343-318008 + | FAD/NAD(P)-binding domain-containing protein |