AcarbonariusITEM5010 Aspergillus carbonarius ITEM 5010

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, KV907495:301239-308178

MATPredictFungiDBCOX13 (flanking_conserved) KV907495:301239-301937 - identity 75.4COX13APN2 (flanking_conserved) KV907495:302317-304451 + identity 90.9APN2MAT1-2-1 (core_MAT) KV907495:305711-306828 - identity 52.5MAT1-2-1MAT1-2-4 (core_MAT) KV907495:307323-308178 + identity 48.8MAT1-2-4CIMG_00407 (core_MAT) KV907495:307557-308054 + identity 25.749CIMG_00407ASPCADRAFT_139768 297723-300734 +: Anaphase-promoting complex subunit 5 (Cyclosome subunit 5)ASPCADRAFT_139768ASPCADRAFT_204313 300778-302002 -: Cytochrome c oxidase subunit (Cytochrome c oxidase polypeptide VIa)ASPCADRAFT_204313ASPCADRAFT_204314 302197-304614 +: DNA-(apurinic or apyrimidinic site) endonuclease 2ASPCADRAFT_204314ASPCADRAFT_1991 305711-306828 -: HMG box domain-containing proteinASPCADRAFT_1991ASPCADRAFT_1992 307323-308178 +: Mating locus proteinASPCADRAFT_1992ASPCADRAFT_204318 310776-312199 +: HD/PDEase domain-containing proteinASPCADRAFT_204318ASPCADRAFT_204319 312437-314977 +: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase)ASPCADRAFT_204319ASPCADRAFT_162137 313152-314994 -: NADH:ubiquinone oxidoreductase intermediate-associated protein 30 domain-containing proteinASPCADRAFT_162137298 kb300 kb302 kb304 kb306 kb308 kb310 kb312 kbKV907495
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved301239-301937 -annotatedASPCADRAFT_204313Cytochrome c oxidase subunit (Cytochrome c oxidase polypeptide VIa)ASPCADRAFT_204313 covers 100% of it on the same strand
APN2flanking_conserved302317-304451 +annotatedASPCADRAFT_204314DNA-(apurinic or apyrimidinic site) endonuclease 2ASPCADRAFT_204314 covers 100% of it on the same strand
MAT1-2-1core_MAT305711-306828 -annotatedASPCADRAFT_1991HMG box domain-containing proteinASPCADRAFT_1991 covers 100% of it on the same strand
MAT1-2-4core_MAT307323-308178 +annotatedASPCADRAFT_1992Mating locus proteinASPCADRAFT_1992 covers 100% of it on the same strand
CIMG_00407core_MAT307557-308054 +annotatedASPCADRAFT_1992Mating locus proteinASPCADRAFT_1992 covers 100% of it on the same strand