AcampestrisIBT28561 Aspergillus campestris IBT 28561

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, MSFM01000001:238083-250415

MATPredictFungiDBSLA2 (flanking_conserved) MSFM01000001:238083-241983 + identity 88.8SLA2MAT1-1-1 (core_MAT) MSFM01000001:244122-245271 - identity 50.0MAT1-1-1MAT1-1-3 (core_MAT) MSFM01000001:245833-245955 + identity 34.146MAT1-1-3MAT1-2-1 (core_MAT) MSFM01000001:245875-246279 + identity 66.7MAT1-2-1APN2 (flanking_conserved) MSFM01000001:247229-249310 - identity 86.4APN2COX13 (flanking_conserved) MSFM01000001:249626-250415 + identity 73.7COX13P168DRAFT_294024 229232-233611 +: terpenoid synthaseP168DRAFT_294024P168DRAFT_285952 235052-237630 +: Pleckstrin homology domain | domain-containing proteinP168DRAFT_285952P168DRAFT_285953 237794-242117 +: cytoskeleton assembly control protein Sla2P168DRAFT_285953P168DRAFT_1806 243467-243984 -: hypothetical proteinP168DRAFT_1806P168DRAFT_313902 244122-245271 -: mating-type alpha-box proteinP168DRAFT_313902P168DRAFT_285957 245769-246418 +: hypothetical proteinP168DRAFT_285957P168DRAFT_285959 246774-249354 -: DNA lyase Apn2P168DRAFT_285959P168DRAFT_300586 249626-250521 +: putative cytochrome c oxidase subunit VIaP168DRAFT_300586P168DRAFT_308029 250755-253460 -: anaphase-promoting complex proteinP168DRAFT_308029P168DRAFT_285960 253823-254286 -: hypothetical proteinP168DRAFT_285960P168DRAFT_322995 254942-260152 +: NB-ARC domain | domain-containing proteinP168DRAFT_322995234 kb236 kb238 kb240 kb242 kb244 kb246 kb248 kb250 kb252 kb254 kbMSFM01000001
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved238083-241983 +annotatedP168DRAFT_285953cytoskeleton assembly control protein Sla2P168DRAFT_285953 covers 100% of it on the same strand
MAT1-1-1core_MAT244122-245271 -annotatedP168DRAFT_313902mating-type alpha-box proteinP168DRAFT_313902 covers 100% of it on the same strand
MAT1-1-3core_MAT245833-245955 +annotatedP168DRAFT_285957hypothetical proteinP168DRAFT_285957 covers 100% of it on the same strand
MAT1-2-1core_MAT245875-246279 +annotatedP168DRAFT_285957hypothetical proteinP168DRAFT_285957 covers 100% of it on the same strand
APN2flanking_conserved247229-249310 -annotatedP168DRAFT_285959DNA lyase Apn2P168DRAFT_285959 covers 100% of it on the same strand
COX13flanking_conserved249626-250415 +annotatedP168DRAFT_300586putative cytochrome c oxidase subunit VIaP168DRAFT_300586 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
P168DRAFT_1806243467-243984 -hypothetical protein