AbrasiliensisCBS101740 Aspergillus brasiliensis CBS 101740

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, KV878679:4244901-4278419

MATPredictFungiDBMAT1-2-4 (core_MAT) KV878679:4244901-4245749 - identity 45.3MAT1-2-4CIMG_00407 (core_MAT) KV878679:4245018-4245530 - identity 22.778CIMG_00407MAT1-2-1 (core_MAT) KV878679:4246236-4247351 + identity 60.7MAT1-2-1APN2 (flanking_conserved) KV878679:4248387-4250521 - identity 90.9APN2COX13 (flanking_conserved) KV878679:4250945-4251658 + identity 75.9COX13SLA2 (flanking_conserved) KV878679:4274600-4278419 - identity 89.8SLA2ASPBRDRAFT_265564 4239760-4241048 -: phosphoribosylaminoimidazolesuccinocarboxamide synthaseASPBRDRAFT_265564ASPBRDRAFT_37523 4241065-4242407 -: hypothetical proteinASPBRDRAFT_37523ASPBRDRAFT_25894 4244901-4245749 -: hypothetical proteinASPBRDRAFT_25894ASPBRDRAFT_167991 4246236-4247351 +: HMG (high mobility group) box | domain-containing proteinASPBRDRAFT_167991ASPBRDRAFT_37526 4247919-4250674 -: DNA-(apurinic or apyrimidinic site) endonuclease 2ASPBRDRAFT_37526ASPBRDRAFT_112056 4250945-4251658 +: Cytochrome c oxidase subunit VIa | domain-containing proteinASPBRDRAFT_112056ASPBRDRAFT_114297 4252082-4254710 -: Anaphase-promoting complex subunit 5 | domain-containing proteinASPBRDRAFT_114297ASPBRDRAFT_112742 4256454-4256994 +: hypothetical proteinASPBRDRAFT_112742ASPBRDRAFT_265783 4258514-4259523 +: CorA-like Mg2+ transporter protein | domain-containing proteinASPBRDRAFT_265783ASPBRDRAFT_71491 4259740-4260771 +: Haloacid dehalogenase-like hydrolase | domain-containing proteinASPBRDRAFT_71491ASPBRDRAFT_203109 4260842-4262665 -: hypothetical proteinASPBRDRAFT_203109ASPBRDRAFT_51069 4263616-4265478 +: hypothetical proteinASPBRDRAFT_51069ASPBRDRAFT_113000 4266824-4268203 +: hypothetical proteinASPBRDRAFT_113000ASPBRDRAFT_37533 4268392-4270087 -: aldehyde dehydrogenase (NAD+)ASPBRDRAFT_37533ASPBRDRAFT_265854 4270147-4272417 +: CoA-transferase family III | domain-containing proteinASPBRDRAFT_265854ASPBRDRAFT_112077 4272515-4274169 +: hypothetical proteinASPBRDRAFT_112077ASPBRDRAFT_61705 4274600-4278804 -: ANTH domain | I/LWEQ domain | domain-containing proteinASPBRDRAFT_61705ASPBRDRAFT_37536 4278887-4282727 -: Maintenance of mitochondrial morphology protein 1 | Pleckstrin homology domain | domain-containing proteinASPBRDRAFT_375364240 kb4244 kb4248 kb4252 kb4256 kb4260 kb4264 kb4268 kb4272 kb4276 kb4280 kbKV878679
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-2-4core_MAT4244901-4245749 -annotatedASPBRDRAFT_25894hypothetical proteinASPBRDRAFT_25894 covers 100% of it on the same strand
CIMG_00407core_MAT4245018-4245530 -annotatedASPBRDRAFT_25894hypothetical proteinASPBRDRAFT_25894 covers 100% of it on the same strand
MAT1-2-1core_MAT4246236-4247351 +annotatedASPBRDRAFT_167991HMG (high mobility group) box | domain-containing proteinASPBRDRAFT_167991 covers 100% of it on the same strand
APN2flanking_conserved4248387-4250521 -annotatedASPBRDRAFT_37526DNA-(apurinic or apyrimidinic site) endonuclease 2ASPBRDRAFT_37526 covers 100% of it on the same strand
COX13flanking_conserved4250945-4251658 +annotatedASPBRDRAFT_112056Cytochrome c oxidase subunit VIa | domain-containing proteinASPBRDRAFT_112056 covers 100% of it on the same strand
SLA2flanking_conserved4274600-4278419 -annotatedASPBRDRAFT_61705ANTH domain | I/LWEQ domain | domain-containing proteinASPBRDRAFT_61705 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
ASPBRDRAFT_1142974252082-4254710 -Anaphase-promoting complex subunit 5 | domain-containing protein
ASPBRDRAFT_1127424256454-4256994 +hypothetical protein
ASPBRDRAFT_2657834258514-4259523 +CorA-like Mg2+ transporter protein | domain-containing protein
ASPBRDRAFT_714914259740-4260771 +Haloacid dehalogenase-like hydrolase | domain-containing protein
ASPBRDRAFT_2031094260842-4262665 -hypothetical protein
ASPBRDRAFT_510694263616-4265478 +hypothetical protein
ASPBRDRAFT_1130004266824-4268203 +hypothetical protein
ASPBRDRAFT_375334268392-4270087 -aldehyde dehydrogenase (NAD+)
ASPBRDRAFT_2658544270147-4272417 +CoA-transferase family III | domain-containing protein
ASPBRDRAFT_1120774272515-4274169 +hypothetical protein