ZtriticiIPO323 Zymoseptoria tritici IPO323

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, Ztri_chr_13:616612-623141

MATPredictFungiDBAPN2 (flanking_conserved) Ztri_chr_13:616612-618487 + identity 94.6APN2MAT1-1-1 (core_MAT) Ztri_chr_13:622002-623141 + identity 96.1MAT1-1-1ZTRI_13.208 609877-612436 -: hypothetical proteinZTRI_13.208ZTRI_13.209 613587-616304 -: similar to anaphase-promoting complex subunit Apc5ZTRI_13.209ZTRI_13.210 616612-618487 +: similar to DNA lyase Apn2ZTRI_13.210ZTRI_13.211 620513-621739 -: hypothetical proteinZTRI_13.211ZTRI_13.212 622002-623141 +: similar to mating-type 1-1 proteinZTRI_13.212ZTRI_13.213 623654-624554 +: hypothetical proteinZTRI_13.213ZTRI_13.214 624691-625709 -: hypothetical proteinZTRI_13.214ZTRI_13.215 625879-626711 +: hypothetical proteinZTRI_13.215ZTRI_13.216 627492-628277 -: similar to 3-oxoacyl-ACP reductaseZTRI_13.216612 kb614 kb616 kb618 kb620 kb622 kb624 kb626 kb628 kbZtri_chr_13
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
APN2flanking_conserved616612-618487 +annotatedZTRI_13.210similar to DNA lyase Apn2ZTRI_13.210 covers 100% of it on the same strand
MAT1-1-1core_MAT622002-623141 +annotatedZTRI_13.212similar to mating-type 1-1 proteinZTRI_13.212 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
ZTRI_13.211620513-621739 -hypothetical protein