RdelemarRA99-880 Rhizopus delemar RA 99-880
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Mucoromycota_MAT_0: Plus Mucoromycota:MAT, confidence high, CH476732:3251438-3316651
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| btbA | flanking_variable | 3305306-3307136 + | annotated | RO3G_01289 | hypothetical protein | RO3G_01289 covers 100% of it on the same strand |
| sexP | core_MAT | 3309519-3310457 + | novel | — | no FungiDB gene overlaps this MATPredict gene | |
| rnhA | flanking_conserved | 3310529-3314719 + | annotated | RO3G_01291 | hypothetical protein | RO3G_01291 covers 100% of it on the same strand |
| glrA | flanking_variable | 3315053-3316651 - | annotated | RO3G_01292 | glutathione-disulfide reductase | RO3G_01292 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| RO3G_01272 | 3251438-3257236 - | hypothetical protein |
| RO3G_01273 | 3258582-3258781 - | hypothetical protein |
| RO3G_01274 | 3261122-3262273 + | hypothetical protein |
| RO3G_01275 | 3263700-3265066 + | ATP-dependent Clp protease, ATP-binding subunit ClpX |
| RO3G_01276 | 3265412-3267793 + | hypothetical protein |
| RO3G_01277 | 3268617-3268988 + | hypothetical protein |
| RO3G_01278 | 3269672-3270230 - | rhizopuspepsin |
| RO3G_01279 | 3270544-3270996 - | hypothetical protein |
| RO3G_01280 | 3272485-3273433 + | prohibitin-1 |
| RO3G_19014 | 3278209-3278280 - | tRNA-Glu |
| RO3G_01281 | 3282636-3282902 + | hypothetical protein |
| RO3G_01282 | 3283909-3285014 + | hypothetical protein |
| RO3G_01283 | 3288551-3289649 - | hypothetical protein |
| RO3G_01284 | 3291838-3292579 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
| RO3G_01285 | 3292826-3294515 + | ATP synthase subunit beta |
| RO3G_01286 | 3294641-3295459 + | hypothetical protein |
| RO3G_01287 | 3295901-3296140 - | hypothetical protein |
| RO3G_01288 | 3303487-3304968 + | hypothetical protein |
| RO3G_01290 | 3307465-3308089 + | hypothetical protein |