Pwakefieldiae2A Pneumocystis wakefieldiae 2A

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_PM_0: P Ascomycota:PM, confidence medium, CP054543:71161-81241

MATPredictFungiDBmatPi (core_MAT) CP054543:71161-71925 - identity 91.5matPimatMc (core_MAT) CP054543:79975-81241 - identity 76.3matMcMERGE_000828 66514-70213 -: hypothetical proteinMERGE_000828MERGE_000829 70357-70883 +: hypothetical proteinMERGE_000829MERGE_000830 71161-71925 -: hypothetical proteinMERGE_000830MERGE_000831 72029-79513 +: hypothetical proteinMERGE_000831MERGE_000832 79975-81241 -: hypothetical proteinMERGE_000832MERGE_000833 81482-82376 +: hypothetical proteinMERGE_000833MERGE_000834 83161-84261 +: hypothetical proteinMERGE_000834MERGE_000835 84844-87474 +: hypothetical proteinMERGE_00083568 kb70 kb72 kb74 kb76 kb78 kb80 kb82 kb84 kb86 kbCP054543
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
matPicore_MAT71161-71925 -annotatedMERGE_000830hypothetical proteinMERGE_000830 covers 100% of it on the same strand
matMccore_MAT79975-81241 -annotatedMERGE_000832hypothetical proteinMERGE_000832 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
MERGE_00083172029-79513 +hypothetical protein