PpennisetigenaBr36 Pyricularia pennisetigena Br36

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, RRCL01000008:909619-925926

MATPredictFungiDBMAT1-1-1 (core_MAT) RRCL01000008:909619-910699 + identity 35.1MAT1-1-1MAT1-2-1 (core_MAT) RRCL01000008:912634-913885 + identity 37.9MAT1-2-1APN2 (flanking_conserved) RRCL01000008:914581-916949 - identity 86.4APN2COX13 (flanking_conserved) RRCL01000008:924839-925926 - identity 68.3COX13PpBr36_09385 904628-906364 +: unspecified productPpBr36_09385PpBr36_09386 909619-910699 +: unspecified productPpBr36_09386PpBr36_09387 910869-912200 -: unspecified productPpBr36_09387PpBr36_09388 912634-913885 +: unspecified productPpBr36_09388PpBr36_09389 914581-916949 -: unspecified productPpBr36_09389PpBr36_09390 917695-920427 +: unspecified productPpBr36_09390PpBr36_09391 920911-922686 -: unspecified productPpBr36_09391PpBr36_09392 924839-925926 -: unspecified productPpBr36_09392PpBr36_09393 926761-928654 +: unspecified productPpBr36_09393PpBr36_09394 929444-932081 +: unspecified productPpBr36_09394908 kb912 kb916 kb920 kb924 kb928 kbRRCL01000008
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-1-1core_MAT909619-910699 +annotatedPpBr36_09386unspecified productPpBr36_09386 covers 100% of it on the same strand
MAT1-2-1core_MAT912634-913885 +annotatedPpBr36_09388unspecified productPpBr36_09388 covers 100% of it on the same strand
APN2flanking_conserved914581-916949 -annotatedPpBr36_09389unspecified productPpBr36_09389 covers 100% of it on the same strand
COX13flanking_conserved924839-925926 -annotatedPpBr36_09392unspecified productPpBr36_09392 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
PpBr36_09387910869-912200 -unspecified product
PpBr36_09390917695-920427 +unspecified product
PpBr36_09391920911-922686 -unspecified product