PostreatusPC15 Pleurotus ostreatus PC15

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_Aalpha_0: undetermined Basidiomycota:Aalpha, confidence high, KL198006:3096122-3110762

MATPredictFungiDBZ (core_MAT) KL198006:3102372-3102776 - identity 30.37ZY (core_MAT) KL198006:3106277-3106530 + identity 54.9Ybeta_fg (flanking_conserved) KL198006:3096122-3097206 + identity 48.2beta_fgHD1 (core_MAT) KL198006:3100614-3102779 - identity 35.3HD1HD2 (core_MAT) KL198006:3106277-3106530 + identity 63.1HD2MIP1 (flanking_conserved) KL198006:3108235-3110762 - identity 76.2MIP1PLEOSDRAFT_166368 3096122-3097206 +: unspecified productPLEOSDRAFT_166368PLEOSDRAFT_155731 3097624-3099705 -: A mating type proteinPLEOSDRAFT_155731PLEOSDRAFT_155732 3100614-3102779 -: A mating type proteinPLEOSDRAFT_155732PLEOSDRAFT_173139 3102945-3105578 +: A mating type proteinPLEOSDRAFT_173139PLEOSDRAFT_1026389 3106277-3106530 +: Homeobox domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A067NVN4]PLEOSDRAFT_1026389PLEOSDRAFT_155735 3108235-3110762 -: Peptidase_M3 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A067NU70]PLEOSDRAFT_155735PLEOSDRAFT_1063011 3110920-3113275 -: unspecified productPLEOSDRAFT_1063011PLEOSDRAFT_1111658 3113440-3114080 -: unspecified productPLEOSDRAFT_1111658PLEOSDRAFT_1036816 3114255-3115568 +: unspecified productPLEOSDRAFT_1036816PLEOSDRAFT_1111659 3115752-3121075 +: Conserved oligomeric Golgi complex subunit 1 [Source:UniProtKB/TrEMBL;Acc:A0A067NT16]PLEOSDRAFT_11116593092 kb3096 kb3100 kb3104 kb3108 kb3112 kbKL198006
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
Zcore_MAT3102372-3102776 -annotatedPLEOSDRAFT_155732A mating type proteinPLEOSDRAFT_155732 covers 100% of it on the same strand
Ycore_MAT3106277-3106530 +annotatedPLEOSDRAFT_1026389Homeobox domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A067NVN4]PLEOSDRAFT_1026389 covers 100% of it on the same strand
beta_fgflanking_conserved3096122-3097206 +annotatedPLEOSDRAFT_166368unspecified productPLEOSDRAFT_166368 covers 100% of it on the same strand
HD1core_MAT3100614-3102779 -annotatedPLEOSDRAFT_155732A mating type proteinPLEOSDRAFT_155732 covers 100% of it on the same strand
HD2core_MAT3106277-3106530 +annotatedPLEOSDRAFT_1026389Homeobox domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A067NVN4]PLEOSDRAFT_1026389 covers 100% of it on the same strand
MIP1flanking_conserved3108235-3110762 -annotatedPLEOSDRAFT_155735Peptidase_M3 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A067NU70]PLEOSDRAFT_155735 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
PLEOSDRAFT_1557313097624-3099705 -A mating type protein
PLEOSDRAFT_1731393102945-3105578 +A mating type protein