PfijiensisCIRAD86 Pseudocercospora fijiensis CIRAD86
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, KB446556:7536920-7571368
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| MAT1-2-4 | core_MAT | 7536920-7537210 - | annotated | MYCFIDRAFT_151905 | Cytochrome P450 monooxygenase [Source:UniProtKB/TrEMBL;Acc:M3BCL8] | MYCFIDRAFT_151905 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 7550637-7552505 + | annotated | MYCFIDRAFT_194837 | DNA-(apurinic or apyrimidinic site) endonuclease 2 [Source:UniProtKB/TrEMBL;Acc:M3A754] | MYCFIDRAFT_194837 covers 100% of it on the same strand |
| MAT1-1-1 | core_MAT | 7556121-7557442 + | annotated | MYCFIDRAFT_30681 Mat1-1 | alpha1 mating-type protein | MYCFIDRAFT_30681 covers 100% of it on the same strand |
| COX13 | flanking_conserved | 7570631-7571368 - | annotated | MYCFIDRAFT_49391 | Cytochrome c oxidase subunit [Source:UniProtKB/TrEMBL;Acc:M3BCC0] | MYCFIDRAFT_49391 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| MYCFIDRAFT_77292 | 7539063-7542547 - | Actin interacting protein 3 C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:M3A749] |
| MYCFIDRAFT_77291 | 7543672-7545564 + | Zn(2)-C6 fungal-type domain-containing protein [Source:UniProtKB/TrEMBL;Acc:M2ZAR3] |
| MYCFIDRAFT_30236 | 7546728-7547754 - | Phosphoribosylaminoimidazole-succinocarboxamide synthase [Source:UniProtKB/TrEMBL;Acc:M3AQM5] |
| MYCFIDRAFT_210643 | 7547949-7548569 - | unspecified product |
| MYCFIDRAFT_162497 | 7549079-7550275 - | Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:M3BCM3] |
| MYCFIDRAFT_172611 | 7553433-7554606 + | unspecified product |
| MYCFIDRAFT_77287 | 7554645-7555780 - | unspecified product |
| MYCFIDRAFT_122197 | 7562006-7562521 - | unspecified product |
| MYCFIDRAFT_77284 | 7563326-7565937 + | SMP-LTD domain-containing protein [Source:UniProtKB/TrEMBL;Acc:M3A759] |
| MYCFIDRAFT_30433 | 7566966-7568716 + | Enoyl reductase (ER) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:M2ZAS0] |
| MYCFIDRAFT_56208 | 7568733-7570081 - | HAD-superfamily hydrolase [Source:UniProtKB/TrEMBL;Acc:M3AQN3] |