PdigitatumPd1 Penicillium digitatum Pd1
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, JH993634:216061-227050
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| COX13 | flanking_conserved | 216061-216859 - | annotated | PDIP_00820 | Cytochrome c oxidase polypeptide VIa | PDIP_00820 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 217188-219439 + | annotated | PDIP_00830 | DNA lyase Apn2 | PDIP_00830 covers 100% of it on the same strand |
| MAT1-1-1 | core_MAT | 221005-222024 + | annotated | PDIP_00840 | Mating type protein | PDIP_00840 covers 100% of it on the same strand |
| SLA2 | flanking_conserved | 223183-227050 - | annotated | PDIP_00850 | Cytoskeleton assembly control protein Sla2, putative | PDIP_00850 covers 100% of it on the same strand |