PbrasiliensisPb03 Paracoccidioides brasiliensis Pb03

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, KN305539:1302065-1320427

MATPredictFungiDBAPN2 (flanking_conserved) KN305539:1302065-1303654 - identity 71.1APN2COX13 (flanking_conserved) KN305539:1304651-1305357 + identity 79.0COX13MAT1-1-4 (core_MAT) KN305539:1308049-1309846 + identity 38.3MAT1-1-4MAT1-2-1 (core_MAT) KN305539:1311666-1312765 - identity 51.8MAT1-2-1CIMG_00407 (core_MAT) KN305539:1313272-1314192 + identity 30.6CIMG_00407MAT1-2-4 (core_MAT) KN305539:1313689-1313799 + identity 35.135MAT1-2-4SLA2 (flanking_conserved) KN305539:1316612-1320427 - identity 88.7SLA2PABG_05774 1294418-1299920 -: hypothetical proteinPABG_05774PABG_12216 1300135-1300597 +: hypothetical proteinPABG_12216PABG_05775 1302065-1303654 -: hypothetical proteinPABG_05775PABG_05776 1304651-1305357 +: hypothetical proteinPABG_05776PABG_12217 1306202-1306651 +: hypothetical proteinPABG_12217PABG_12218 1308049-1309846 +: hypothetical proteinPABG_12218PABG_05778 1311666-1312765 -: hypothetical proteinPABG_05778PABG_05779 1313272-1314192 +: hypothetical proteinPABG_05779PABG_05780 1316612-1320427 -: hypothetical proteinPABG_05780PABG_05781 1320689-1321346 +: hypothetical proteinPABG_05781PABG_05782 1322314-1325194 -: hypothetical proteinPABG_057821300 kb1304 kb1308 kb1312 kb1316 kb1320 kb1324 kbKN305539
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
APN2flanking_conserved1302065-1303654 -annotatedPABG_05775hypothetical proteinPABG_05775 covers 100% of it on the same strand
COX13flanking_conserved1304651-1305357 +annotatedPABG_05776hypothetical proteinPABG_05776 covers 100% of it on the same strand
MAT1-1-4core_MAT1308049-1309846 +annotatedPABG_12218hypothetical proteinPABG_12218 covers 100% of it on the same strand
MAT1-2-1core_MAT1311666-1312765 -annotatedPABG_05778hypothetical proteinPABG_05778 covers 100% of it on the same strand
CIMG_00407core_MAT1313272-1314192 +annotatedPABG_05779hypothetical proteinPABG_05779 covers 100% of it on the same strand
MAT1-2-4core_MAT1313689-1313799 +annotatedPABG_05779hypothetical proteinPABG_05779 covers 100% of it on the same strand
SLA2flanking_conserved1316612-1320427 -annotatedPABG_05780hypothetical proteinPABG_05780 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
PABG_122171306202-1306651 +hypothetical protein