PanserinaSmat Podospora anserina S mat+
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, CU633445:73400-87562
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| COX13 | flanking_conserved | 73400-74228 - | annotated | PODANS_1_20570 | Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 5 [Source:UniProtKB/TrEMBL;Acc:B2ABG3] | PODANS_1_20570 covers 100% of it on the same strand |
| APN2 | flanking_conserved | 74909-77182 + | annotated | PODANS_1_20580 | Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B2ABG4] | PODANS_1_20580 covers 100% of it on the same strand |
| MAT1-2-1 | core_MAT | 78879-80192 - | annotated | PODANS_1_20590 | HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:B2ABG5] | PODANS_1_20590 covers 100% of it on the same strand |
| SLA2 | flanking_conserved | 84183-87562 - | annotated | PODANS_1_20600 | Podospora anserina S mat+ genomic DNA chromosome 1, supercontig 5 [Source:UniProtKB/TrEMBL;Acc:B2ABG6] | PODANS_1_20600 covers 100% of it on the same strand |