OpiceaeUAMH11346 Ophiostoma piceae UAMH 11346
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, KE148160:377999-415153
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| APN2 | flanking_conserved | 377999-380603 + | annotated | F503_03619 | Apurinic-apyrimidinic endonuclease 2 [Source:UniProtKB/TrEMBL;Acc:S3BVH3] | F503_03619 covers 100% of it on the same strand |
| COX13 | flanking_conserved | 385195-385881 + | annotated | F503_03621 | Cytochrome c oxidase subunit [Source:UniProtKB/TrEMBL;Acc:S3BTG1] | F503_03621 covers 100% of it on the same strand |
| MAT1-2-1 | core_MAT | 406396-407379 - | annotated | F503_03625 | HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:S3CDY9] | F503_03625 covers 100% of it on the same strand |
| MAT1-1-1 | core_MAT | 408629-409863 + | annotated | F503_03626 | Mat1-1-1 [Source:UniProtKB/TrEMBL;Acc:S3BTG5] | F503_03626 covers 100% of it on the same strand |
| SLA2 | flanking_conserved | 411760-415153 - | annotated | F503_03627 | Cytoskeleton assembly control protein sla2 [Source:UniProtKB/TrEMBL;Acc:S3CUZ4] | F503_03627 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| F503_03620 | 381081-382891 - | RING-type domain-containing protein [Source:UniProtKB/TrEMBL;Acc:S3CDY4] |
| F503_03622 | 386827-390055 - | unspecified product |
| F503_03623 | 399269-401086 + | unspecified product |
| F503_03624 | 401132-402100 + | unspecified product |