NglabratusDSY562 Nakaseomyces glabratus DSY562
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Ascomycota_MATsc_0: MATalpha Ascomycota:MATsc, confidence medium, CM008082:13469-14989
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| MATALPHA1 | core_MAT | 13469-14023 - | annotated | B1J91_B00242g | unspecified product | B1J91_B00242g covers 100% of it on the same strand |
| MATA2 | core_MAT | 14357-14989 + | annotated | B1J91_B00264g MTL3alpha2 | Mating-type-like protein ALPHA2, silenced copy at MTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q870I4] | B1J91_B00264g covers 100% of it on the same strand |
| MATALPHA2 | core_MAT | 14357-14989 + | annotated | B1J91_B00264g MTL3alpha2 | Mating-type-like protein ALPHA2, silenced copy at MTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q870I4] | B1J91_B00264g covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| B1J91_B00220g | 13272-13502 + | Ribosomal RNA small subunit methyltransferase NEP1 [Source:UniProtKB/TrEMBL;Acc:A0A0W0C632] |