MsympodialisATCC42132 Malassezia sympodialis ATCC 42132

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_bLocus_0: undetermined Basidiomycota:bLocus, confidence high, LT671821:721646-724665

MATPredictFungiDBbW (core_MAT) LT671821:721646-723292 - identity 96.0bWbE (core_MAT) LT671821:723796-724665 + identity 100.0bEMSYG_0443 713876-718291 +: Similar to S.cerevisiae protein YLR419W (Putative helicase with limited sequence similarity to human Rb protein) [Source:UniProtKB/TrEMBL;Acc:M5EKJ9]MSYG_0443MSYG_0444 718295-719345 -: Aldo_ket_red domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A146]MSYG_0444MSYG_0445 719429-721149 -: Similar to S.cerevisiae protein MUP1 (High affinity methionine permease) [Source:UniProtKB/TrEMBL;Acc:A0A1M8A0X3]MSYG_0445MSYG_0446 721252-723460 -: Homeobox domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A143]MSYG_0446MSYG_0447 723356-724665 +: Homeobox_KN domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A0X5]MSYG_0447MSYG_0448 724750-725307 +: Exosome complex protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A0X7]MSYG_0448MSYG_0449 725415-727184 +: unspecified productMSYG_0449MSYG_0450 727227-729054 +: unspecified productMSYG_0450MSYG_0451 729354-731032 +: MFS domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A0Z4]MSYG_0451718 kb720 kb722 kb724 kb726 kb728 kbLT671821
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
bWcore_MAT721646-723292 -annotatedMSYG_0446Homeobox domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A143]MSYG_0446 covers 100% of it on the same strand
bEcore_MAT723796-724665 +annotatedMSYG_0447Homeobox_KN domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A0X5]MSYG_0447 covers 100% of it on the same strand

Basidiomycota_aLocus_1: undetermined Basidiomycota:aLocus, confidence high, LT671821:866423-868166

MATPredictFungiDBmfa1 (core_MAT) LT671821:866423-866572 - identity 100.0mfa1pra1 (core_MAT) LT671821:866952-868166 + identity 33.2pra1MSYG_0526 860838-863645 +: DH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A1B8]MSYG_0526MSYG_0527 863691-864771 -: Glyceraldehyde-3-phosphate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:M5EQB0]MSYG_0527MSYG_0528 864898-865858 -: Similar to S.cerevisiae protein SKI6 (Exosome non-catalytic core component) [Source:UniProtKB/TrEMBL;Acc:A0A1M8A156]MSYG_0528MSYG_0529 866086-866243 +: unspecified productMSYG_0529MSYG_0530 866784-868378 +: unspecified productMSYG_0530MSYG_0531 868027-869403 -: VWFA domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A187]MSYG_0531MSYG_0532 869518-870480 +: Poly(A)-specific ribonuclease [Source:UniProtKB/TrEMBL;Acc:A0A1M8A166]MSYG_0532MSYG_0533 870518-871197 -: UBC core domain-containing protein [Source:UniProtKB/TrEMBL;Acc:M5EQA6]MSYG_0533MSYG_0534 871269-873034 +: Metallophos domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A158]MSYG_0534MSYG_0535 872922-875299 -: Tr-type G domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A1D0]MSYG_0535862 kb863 kb864 kb865 kb866 kb867 kb868 kb869 kb870 kb871 kb872 kb873 kbLT671821
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
mfa1core_MAT866423-866572 -novel—no FungiDB gene overlaps this MATPredict gene
pra1core_MAT866952-868166 +annotatedMSYG_0530unspecified productMSYG_0530 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
MSYG_0531868027-869403 -VWFA domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1M8A187]