MrestrictaCBS7877 Malassezia restricta CBS 7877 Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
Basidiomycota_bLocus_0: undetermined Basidiomycota:bLocus, confidence high, CP033152:360779-364421 MATPredict FungiDB bW (core_MAT) CP033152:360779-362362 - identity 75.0 bW bE (core_MAT) CP033152:362854-363765 + identity 45.6 bE DNF11_2868 354469-358824 +: uncharacterized protein DNF11_2868 DNF11_2869 358863-360578 -: High-affinity methionine permease DNF11_2869 DNF11_2870 360779-362362 -: Homeobox-leucine zipper protein HOX20 DNF11_2870 DNF11_2871 362854-363765 +: Mating-type locus allele B4 protein DNF11_2871 DNF11_2872 363867-364421 +: Nuclear nucleic acid-binding protein C1D DNF11_2872 DNF11_2873 364495-366162 +: unspecified product DNF11_2873 DNF11_2874 368096-369731 -: putative acyl-CoA dehydrogenase DNF11_2874 356 kb 358 kb 360 kb 362 kb 364 kb 366 kb 368 kb CP033152 MATPredict gene Role Coordinates Verdict FungiDB gene FungiDB product Why bW core_MAT 360779-362362 - annotated DNF11_2870 Homeobox-leucine zipper protein HOX20 DNF11_2870 covers 100% of it on the same strand bE core_MAT 362854-363765 + annotated DNF11_2871 Mating-type locus allele B4 protein DNF11_2871 covers 100% of it on the same strand
FungiDB genes inside the locus span that MATPredict did not model:
FungiDB gene Coordinates Product DNF11_2872 363867-364421 + Nuclear nucleic acid-binding protein C1D
Basidiomycota_aLocus_1: undetermined Basidiomycota:aLocus, confidence high, CP033151:606067-607706 MATPredict FungiDB pra1 (core_MAT) CP033151:606334-607021 - identity 24.07 pra1 mfa1 (core_MAT) CP033151:607557-607706 + identity 46.0 mfa1 DNF11_2525 600835-602979 +: Translation initiation factor IF-2, mitochondrial DNF11_2525 DNF11_2526 603044-603559 +: Ubiquitin-conjugating enzyme E2 G1 DNF11_2526 DNF11_2527 603562-604584 -: CCR4-NOT transcription complex subunit 7 DNF11_2527 DNF11_2528 604623-605708 +: 26S proteasome regulatory subunit rpn10 DNF11_2528 DNF11_2529 605829-606468 -: Pheromone receptor 1 DNF11_2529 DNF11_2530 608268-609105 +: Exosome complex component RRP41 DNF11_2530 DNF11_2531 609342-610352 +: Glyceraldehyde-3-phosphate dehydrogenase DNF11_2531 DNF11_2532 610364-612964 -: Rho guanine nucleotide exchange factor scd1 DNF11_2532 602 kb 603 kb 604 kb 605 kb 606 kb 607 kb 608 kb 609 kb 610 kb 611 kb 612 kb CP033151 MATPredict gene Role Coordinates Verdict FungiDB gene FungiDB product Why pra1 core_MAT 606334-607021 - partial DNF11_2529 Pheromone receptor 1 DNF11_2529 overlaps only 20% of it mfa1 core_MAT 607557-607706 + novel — no FungiDB gene overlaps this MATPredict gene