MphaseolinaMS6 Macrophomina phaseolina MS6

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, AHHD01000467:123189-132683

MATPredictFungiDBMAT1-1-1 (core_MAT) AHHD01000467:123189-124579 - identity 41.0MAT1-1-1APN2 (flanking_conserved) AHHD01000467:127078-130846 - identity 84.1APN2COX13 (flanking_conserved) AHHD01000467:131417-132683 + identity 72.3COX13MPH_11056 118976-119841 -: unspecified productMPH_11056MPH_11057 121728-122264 -: unspecified productMPH_11057MPH_11058 123189-124579 -: Mating-type protein MAT alpha 1MPH_11058MPH_11059 124991-126278 +: unspecified productMPH_11059MPH_11060 127078-130846 -: Exodeoxyribonuclease III xthMPH_11060MPH_11061 131417-132683 +: Cytochrome c oxidase subunit VIaMPH_11061MPH_11062 133106-136018 -: Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:K2RN16]MPH_11062MPH_11063 136704-137381 -: Galactose-binding domain-like proteinMPH_11063120 kb122 kb124 kb126 kb128 kb130 kb132 kb134 kb136 kbAHHD01000467
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-1-1core_MAT123189-124579 -annotatedMPH_11058Mating-type protein MAT alpha 1MPH_11058 covers 100% of it on the same strand
APN2flanking_conserved127078-130846 -annotatedMPH_11060Exodeoxyribonuclease III xthMPH_11060 covers 100% of it on the same strand
COX13flanking_conserved131417-132683 +annotatedMPH_11061Cytochrome c oxidase subunit VIaMPH_11061 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
MPH_11059124991-126278 +unspecified product