LtigrinusALCF2SS1-7 Lentinus tigrinus ALCF2SS1-7
Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.
core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict
Basidiomycota_HD_0: undetermined Basidiomycota:HD, confidence high, ML122043:2158054-2166246
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| MIP1 | flanking_conserved | 2158054-2160530 + | annotated | L226DRAFT_549213 | mitochondrial intermediate peptidase | L226DRAFT_549213 covers 100% of it on the same strand |
| HD2 | core_MAT | 2161348-2161587 - | annotated | L226DRAFT_24541 | unspecified product | L226DRAFT_24541 covers 100% of it on the same strand |
| HD1 | core_MAT | 2162791-2163081 + | annotated | L226DRAFT_564962 | Mating-type protein A-alpha/beta 1 N-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2TZ14] | L226DRAFT_564962 covers 100% of it on the same strand |
| beta_fg | flanking_conserved | 2165286-2166246 - | annotated | L226DRAFT_607515 | Beta-flanking protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2UBG3] | L226DRAFT_607515 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| L226DRAFT_24547 | 2161736-2162605 - | unspecified product |
Basidiomycota_PR_1: undetermined Basidiomycota:PR, confidence medium, ML122049:412981-460156
| MATPredict gene | Role | Coordinates | Verdict | FungiDB gene | FungiDB product | Why |
|---|---|---|---|---|---|---|
| pheromone_receptor | core_MAT | 442380-443637 - | annotated | L226DRAFT_483158 | fungal pheromone STE3G-protein-coupled receptor | L226DRAFT_483158 covers 100% of it on the same strand |
| caax_precursor | core_MAT | 444177-444341 + | annotated | L226DRAFT_532945 | Pheromone [Source:UniProtKB/TrEMBL;Acc:A0A5C2TLW7] | L226DRAFT_532945 covers 100% of it on the same strand |
| pheromone_B43 | core_MAT | 457867-457977 - | annotated | L226DRAFT_532953 | Pheromone [Source:UniProtKB/TrEMBL;Acc:A0A5C2TKF8] | L226DRAFT_532953 covers 100% of it on the same strand |
| fungal_mating_type_pheromone | core_MAT | 460025-460153 + | annotated | L226DRAFT_355066 | unspecified product | L226DRAFT_355066 covers 100% of it on the same strand |
FungiDB genes inside the locus span that MATPredict did not model:
| FungiDB gene | Coordinates | Product |
|---|---|---|
| L226DRAFT_602096 | 412785-414570 - | STE3-domain-containing protein |
| L226DRAFT_611328 | 416793-418259 + | MYND-type domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2TL49] |
| L226DRAFT_551798 | 419605-420872 + | MYND-type domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2TI98] |
| L226DRAFT_569157 | 422603-424479 + | STE3-domain-containing protein |
| L226DRAFT_459267 | 425110-426666 + | unspecified product |
| L226DRAFT_354773 | 426807-427853 + | unspecified product |
| L226DRAFT_569159 | 427939-429732 - | unspecified product |
| L226DRAFT_569160 | 430740-431489 - | unspecified product |
| L226DRAFT_354808 | 431397-432356 - | unspecified product |
| L226DRAFT_611334 | 432795-434527 + | F-box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2TKE9] |
| L226DRAFT_433016 | 435301-435633 - | unspecified product |
| L226DRAFT_459935 | 437933-439301 + | MYND-type domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2TL59] |
| L226DRAFT_354894 | 445675-446576 + | unspecified product |
| L226DRAFT_504853 | 448088-450409 - | STE3-domain-containing protein |
| L226DRAFT_569167 | 451340-451631 - | Fungal-type protein kinase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A5C2TP87] |
| L226DRAFT_354987 | 453157-454173 - | unspecified product |
| L226DRAFT_559134 | 454542-456845 - | STE3-domain-containing protein |