KheveanensisCBS569 Kwoniella heveanensis CBS 569

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_MAT_0: alpha Basidiomycota:MAT, confidence high, KV700203:24629-92088

MATPredictFungiDBRPL39 (core_MAT) KV700203:24629-25189 + identity 90.0RPL39STE3 (core_MAT) KV700203:45608-46326 - identity 48.7STE3MFalpha (core_MAT) KV700203:56345-56461 + identity 71.05MFalphaPAN6 (flanking_conserved) KV700203:90036-92088 - identity 66.5PAN6I317_04330 19451-22686 -: hypothetical proteinI317_04330I317_04331 28096-30054 -: hypothetical proteinI317_04331I317_04332 32363-34843 -: hypothetical proteinI317_04332I317_04333 35238-37689 -: STE/STE20/PAKA protein kinaseI317_04333I317_04334 38145-42528 -: hypothetical proteinI317_04334I317_04335 42982-45516 +: E1-like protein-activating enzyme Gsa7p/Apg7pI317_04335I317_04336 45608-46326 -: hypothetical proteinI317_04336I317_04337 47672-50256 +: hypothetical proteinI317_04337I317_04338 51036-52521 -: pre-60S factor REI1I317_04338I317_04339 52905-55601 +: ATP-dependent RNA helicase DBP10I317_04339I317_04340 56852-59051 -: hypothetical proteinI317_04340I317_04341 59430-60155 -: hypothetical proteinI317_04341I317_04342 61800-64232 -: amino acid transporterI317_04342I317_04343 65765-67060 +: phytanoyl-CoA dioxygenaseI317_04343I317_04344 68165-71894 +: transcription factorI317_04344I317_04345 72222-72798 -: hypothetical proteinI317_04345I317_04346 74253-77039 -: hypothetical proteinI317_04346I317_04347 77640-80824 +: ATPaseI317_04347I317_04348 81555-88748 -: chitin synthaseI317_04348I317_04349 90036-92088 -: pantoate-beta-alanine ligaseI317_04349I317_04350 92828-95279 +: U4/U6 small nuclear ribonucleoprotein PRP4I317_04350I317_04351 95994-99829 -: hypothetical proteinI317_0435124 kb32 kb40 kb48 kb56 kb64 kb72 kb80 kb88 kb96 kbKV700203
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
RPL39core_MAT24629-25189 +novel—no FungiDB gene overlaps this MATPredict gene
STE3core_MAT45608-46326 -annotatedI317_04336hypothetical proteinI317_04336 covers 100% of it on the same strand
MFalphacore_MAT56345-56461 +novel—no FungiDB gene overlaps this MATPredict gene
PAN6flanking_conserved90036-92088 -annotatedI317_04349pantoate-beta-alanine ligaseI317_04349 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
I317_0433128096-30054 -hypothetical protein
I317_0433232363-34843 -hypothetical protein
I317_0433335238-37689 -STE/STE20/PAKA protein kinase
I317_0433438145-42528 -hypothetical protein
I317_0433542982-45516 +E1-like protein-activating enzyme Gsa7p/Apg7p
I317_0433747672-50256 +hypothetical protein
I317_0433851036-52521 -pre-60S factor REI1
I317_0433952905-55601 +ATP-dependent RNA helicase DBP10
I317_0434056852-59051 -hypothetical protein
I317_0434159430-60155 -hypothetical protein
I317_0434261800-64232 -amino acid transporter
I317_0434365765-67060 +phytanoyl-CoA dioxygenase
I317_0434468165-71894 +transcription factor
I317_0434572222-72798 -hypothetical protein
I317_0434674253-77039 -hypothetical protein
I317_0434777640-80824 +ATPase
I317_0434881555-88748 -chitin synthase