KdejecticolaCBS10117 Kwoniella dejecticola CBS 10117

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_MAT_0: alpha Basidiomycota:MAT, confidence medium, KI894028:1906348-1966863

MATPredictFungiDBRPL39 (core_MAT) KI894028:1906348-1906796 + identity 95.92RPL39STE3 (core_MAT) KI894028:1924352-1925662 - identity 54.8STE3MFalpha (core_MAT) KI894028:1934455-1934571 - identity 56.41MFalphaPAN6 (flanking_conserved) KI894028:1965068-1966863 - identity 61.7PAN6I303_02153 1901903-1904834 -: hypothetical proteinI303_02153I303_02154 1907598-1908665 -: hypothetical proteinI303_02154I303_02155 1909268-1911236 -: hypothetical proteinI303_02155I303_02156 1911456-1916481 -: STE/STE20/PAKA protein kinaseI303_02156I303_02157 1916810-1921289 -: hypothetical proteinI303_02157I303_02158 1921741-1924258 +: E1-like protein-activating enzyme Gsa7p/Apg7pI303_02158I303_02159 1924352-1925662 -: hypothetical proteinI303_02159I303_02160 1926295-1929494 +: hypothetical proteinI303_02160I303_02161 1929707-1931105 -: pre-60S factor REI1I303_02161I303_02162 1931536-1934132 +: hypothetical proteinI303_02162I303_02163 1935661-1938481 -: hypothetical proteinI303_02163I303_02164 1938845-1940177 -: hypothetical proteinI303_02164I303_02165 1941059-1948040 +: chitin synthaseI303_02165I303_02166 1949112-1950788 -: hypothetical proteinI303_02166I303_02167 1952927-1955778 +: hypothetical proteinI303_02167I303_02168 1956674-1957296 -: hypothetical proteinI303_02168I303_02169 1958814-1961471 -: hypothetical proteinI303_02169I303_02170 1961816-1964699 +: ATPaseI303_02170I303_02171 1965068-1966863 -: pantoate-beta-alanine ligaseI303_02171I303_02172 1967269-1969781 +: U4/U6 small nuclear ribonucleoprotein PRP4I303_02172I303_02173 1970320-1973722 -: hypothetical proteinI303_021731904 kb1912 kb1920 kb1928 kb1936 kb1944 kb1952 kb1960 kb1968 kbKI894028
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
RPL39core_MAT1906348-1906796 +novel—no FungiDB gene overlaps this MATPredict gene
STE3core_MAT1924352-1925662 -annotatedI303_02159hypothetical proteinI303_02159 covers 100% of it on the same strand
MFalphacore_MAT1934455-1934571 -novel—no FungiDB gene overlaps this MATPredict gene
PAN6flanking_conserved1965068-1966863 -annotatedI303_02171pantoate-beta-alanine ligaseI303_02171 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
I303_021541907598-1908665 -hypothetical protein
I303_021551909268-1911236 -hypothetical protein
I303_021561911456-1916481 -STE/STE20/PAKA protein kinase
I303_021571916810-1921289 -hypothetical protein
I303_021581921741-1924258 +E1-like protein-activating enzyme Gsa7p/Apg7p
I303_021601926295-1929494 +hypothetical protein
I303_021611929707-1931105 -pre-60S factor REI1
I303_021621931536-1934132 +hypothetical protein
I303_021631935661-1938481 -hypothetical protein
I303_021641938845-1940177 -hypothetical protein
I303_021651941059-1948040 +chitin synthase
I303_021661949112-1950788 -hypothetical protein
I303_021671952927-1955778 +hypothetical protein
I303_021681956674-1957296 -hypothetical protein
I303_021691958814-1961471 -hypothetical protein
I303_021701961816-1964699 +ATPase