KbestiolaeCBS10118 Kwoniella bestiolae CBS 10118

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Basidiomycota_MAT_0: alpha Basidiomycota:MAT, confidence high, KI894020:1933744-1992737

MATPredictFungiDBRPL39 (core_MAT) KI894020:1933744-1933993 + identity 90.2RPL39STE3 (core_MAT) KI894020:1951779-1952710 - identity 54.2STE3MFalpha (core_MAT) KI894020:1961844-1961960 - identity 60.53MFalphaPAN6 (flanking_conserved) KI894020:1991126-1992737 - identity 63.7PAN6I302_04106 1926762-1928785 +: hypothetical proteinI302_04106I302_04107 1929318-1932351 -: hypothetical proteinI302_04107I302_04108 1934497-1938088 -: hypothetical proteinI302_04108I302_04109 1938473-1940813 -: kinetochore protein NDC80I302_04109I302_04110 1941198-1943637 -: STE/STE20/PAKA protein kinaseI302_04110I302_04111 1944106-1948593 -: hypothetical proteinI302_04111I302_04112 1949146-1951666 +: E1-like protein-activating enzyme Gsa7p/Apg7pI302_04112I302_04113 1951779-1952710 -: hypothetical proteinI302_04113I302_04114 1953730-1956945 +: hypothetical proteinI302_04114I302_04115 1957049-1958546 -: pre-60S factor REI1I302_04115I302_04116 1958918-1961518 +: ATP-dependent RNA helicase DBP10I302_04116I302_04117 1962876-1965728 -: hypothetical proteinI302_04117I302_04118 1966041-1967260 -: hypothetical proteinI302_04118I302_04119 1968280-1975458 +: chitin synthaseI302_04119I302_04120 1976122-1978871 -: ATPaseI302_04120I302_04121 1979206-1981778 +: hypothetical proteinI302_04121I302_04122 1982897-1983383 +: hypothetical proteinI302_04122I302_04123 1985720-1988566 +: hypothetical proteinI302_04123I302_04124 1989084-1990592 +: hypothetical proteinI302_04124I302_04125 1991126-1992737 -: pantoate-beta-alanine ligaseI302_04125I302_04126 1993203-1995633 +: U4/U6 small nuclear ribonucleoprotein PRP4I302_04126I302_04127 1996056-1999468 -: hypothetical proteinI302_041271936 kb1944 kb1952 kb1960 kb1968 kb1976 kb1984 kb1992 kbKI894020
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
RPL39core_MAT1933744-1933993 +novel—no FungiDB gene overlaps this MATPredict gene
STE3core_MAT1951779-1952710 -annotatedI302_04113hypothetical proteinI302_04113 covers 100% of it on the same strand
MFalphacore_MAT1961844-1961960 -novel—no FungiDB gene overlaps this MATPredict gene
PAN6flanking_conserved1991126-1992737 -annotatedI302_04125pantoate-beta-alanine ligaseI302_04125 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
I302_041081934497-1938088 -hypothetical protein
I302_041091938473-1940813 -kinetochore protein NDC80
I302_041101941198-1943637 -STE/STE20/PAKA protein kinase
I302_041111944106-1948593 -hypothetical protein
I302_041121949146-1951666 +E1-like protein-activating enzyme Gsa7p/Apg7p
I302_041141953730-1956945 +hypothetical protein
I302_041151957049-1958546 -pre-60S factor REI1
I302_041161958918-1961518 +ATP-dependent RNA helicase DBP10
I302_041171962876-1965728 -hypothetical protein
I302_041181966041-1967260 -hypothetical protein
I302_041191968280-1975458 +chitin synthase
I302_041201976122-1978871 -ATPase
I302_041211979206-1981778 +hypothetical protein
I302_041221982897-1983383 +hypothetical protein
I302_041231985720-1988566 +hypothetical protein
I302_041241989084-1990592 +hypothetical protein