FproliferatumNRRL62905 Fusarium proliferatum strain NRRL62905

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, FCQG01000035:218877-232147

MATPredictFungiDBCOX13 (flanking_conserved) FCQG01000035:218877-219638 - identity 70.7COX13APN2 (flanking_conserved) FCQG01000035:220146-222159 + identity 86.4APN2MAT1-2-1 (core_MAT) FCQG01000035:222923-223697 - identity 88.8MAT1-2-1SLA2 (flanking_conserved) FCQG01000035:228566-232147 - identity 81.6SLA2FPRN_08848 213025-214050 -: uncharacterized proteinFPRN_08848FPRN_08847 214537-215375 +: probable complex I intermediate-associated protein CIA30 precursor, mitochondrialFPRN_08847FPRN_08846 215573-218031 -: related to anaphase-promoting complex subunit 5FPRN_08846FPRN_08845 218877-219638 -: related to cytochrome-c oxidase chain VIa precursorFPRN_08845FPRN_08844 220146-222159 +: related to APN2-AP endonuclease, exonuclease III homologFPRN_08844FPRN_08843 222923-223697 -: mating type proteinFPRN_08843FPRN_08842 225234-226044 +: uncharacterized proteinFPRN_08842FPRN_08841 228566-232147 -: probable cytoskeleton assembly control protein SLA2FPRN_08841FPRN_08840 233889-234564 -: probable ribosomal protein L21.e.A, cytosolicFPRN_08840FPRN_08839 234954-235672 +: probable 40S ribosomal protein S9 (S7)FPRN_08839FPRN_08838 236000-237403 -: related to step II splicing factor SLU7FPRN_08838214 kb216 kb218 kb220 kb222 kb224 kb226 kb228 kb230 kb232 kb234 kb236 kbFCQG01000035
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved218877-219638 -annotatedFPRN_08845related to cytochrome-c oxidase chain VIa precursorFPRN_08845 covers 100% of it on the same strand
APN2flanking_conserved220146-222159 +annotatedFPRN_08844related to APN2-AP endonuclease, exonuclease III homologFPRN_08844 covers 100% of it on the same strand
MAT1-2-1core_MAT222923-223697 -annotatedFPRN_08843mating type proteinFPRN_08843 covers 100% of it on the same strand
SLA2flanking_conserved228566-232147 -annotatedFPRN_08841probable cytoskeleton assembly control protein SLA2FPRN_08841 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
FPRN_08842225234-226044 +uncharacterized protein