FproliferatumET1 Fusarium proliferatum ET1

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, FJOF01000006:277080-290385

MATPredictFungiDBSLA2 (flanking_conserved) FJOF01000006:277080-280661 + identity 81.6SLA2MAT1-2-1 (core_MAT) FJOF01000006:285564-286338 + identity 89.2MAT1-2-1APN2 (flanking_conserved) FJOF01000006:287103-289116 - identity 86.4APN2COX13 (flanking_conserved) FJOF01000006:289624-290385 + identity 70.7COX13FPRO_09160 271825-273228 +: related to step II splicing factor SLU7FPRO_09160FPRO_09161 273556-274274 -: probable 40S ribosomal protein S9 (S7)FPRO_09161FPRO_09162 274663-275338 +: probable ribosomal protein L21.e.A, cytosolicFPRO_09162FPRO_09163 277080-280661 +: probable cytoskeleton assembly control protein SLA2FPRO_09163FPRO_09164 283214-283976 -: uncharacterized proteinFPRO_09164FPRO_09165 285564-286338 +: mating type proteinFPRO_09165FPRO_09166 287103-289116 -: related to APN2-AP endonuclease, exonuclease III homologFPRO_09166FPRO_09167 289624-290385 +: related to cytochrome-c oxidase chain VIa precursorFPRO_09167FPRO_09168 291230-293688 +: related to anaphase-promoting complex subunit 5FPRO_09168FPRO_09169 293886-294724 -: probable complex I intermediate-associated protein CIA30 precursor, mitochondrialFPRO_09169FPRO_09170 295211-296236 +: uncharacterized proteinFPRO_09170274 kb276 kb278 kb280 kb282 kb284 kb286 kb288 kb290 kb292 kb294 kbFJOF01000006
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved277080-280661 +annotatedFPRO_09163probable cytoskeleton assembly control protein SLA2FPRO_09163 covers 100% of it on the same strand
MAT1-2-1core_MAT285564-286338 +annotatedFPRO_09165mating type proteinFPRO_09165 covers 100% of it on the same strand
APN2flanking_conserved287103-289116 -annotatedFPRO_09166related to APN2-AP endonuclease, exonuclease III homologFPRO_09166 covers 100% of it on the same strand
COX13flanking_conserved289624-290385 +annotatedFPRO_09167related to cytochrome-c oxidase chain VIa precursorFPRO_09167 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
FPRO_09164283214-283976 -uncharacterized protein