EpasteurianusEp9510 Emergomyces pasteurianus Ep9510

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, LGRN01000028:21777-46402

MATPredictFungiDBMAT1-2-7 (core_MAT) LGRN01000028:21777-21887 - identity 35.135MAT1-2-7APN2 (flanking_conserved) LGRN01000028:29001-31117 - identity 68.9APN2COX13 (flanking_conserved) LGRN01000028:31715-32446 + identity 79.8COX13MAT1-1-4 (core_MAT) LGRN01000028:35400-36838 + identity 43.7MAT1-1-4MAT1-1-1 (core_MAT) LGRN01000028:37594-38874 + identity 47.6MAT1-1-1SLA2 (flanking_conserved) LGRN01000028:42124-46402 - identity 91.4SLA2AJ78_01291 17196-18258 +: phosphoribosylaminoimidazolesuccinocarboxamide synthaseAJ78_01291AJ78_01292 18715-20000 -: unspecified productAJ78_01292AJ78_01293 21050-26525 -: Mediator complex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A1J9PR36]AJ78_01293AJ78_01294 29001-31117 -: Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1J9QR67]AJ78_01294AJ78_01295 31715-32446 +: unspecified productAJ78_01295AJ78_01296 33259-34248 +: unspecified productAJ78_01296AJ78_01297 35400-36838 +: unspecified productAJ78_01297AJ78_01298 37594-38874 +: Alpha box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1J9QER1]AJ78_01298AJ78_01299 42124-46402 -: unspecified productAJ78_01299AJ78_01300 47543-50450 -: unspecified productAJ78_01300AJ78_01301 51290-54068 -: unspecified productAJ78_0130120 kb24 kb28 kb32 kb36 kb40 kb44 kb48 kbLGRN01000028
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-2-7core_MAT21777-21887 -annotatedAJ78_01293Mediator complex subunit 12 [Source:UniProtKB/TrEMBL;Acc:A0A1J9PR36]AJ78_01293 covers 100% of it on the same strand
APN2flanking_conserved29001-31117 -annotatedAJ78_01294Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1J9QR67]AJ78_01294 covers 100% of it on the same strand
COX13flanking_conserved31715-32446 +annotatedAJ78_01295unspecified productAJ78_01295 covers 100% of it on the same strand
MAT1-1-4core_MAT35400-36838 +annotatedAJ78_01297unspecified productAJ78_01297 covers 100% of it on the same strand
MAT1-1-1core_MAT37594-38874 +annotatedAJ78_01298Alpha box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1J9QER1]AJ78_01298 covers 100% of it on the same strand
SLA2flanking_conserved42124-46402 -annotatedAJ78_01299unspecified productAJ78_01299 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
AJ78_0129633259-34248 +unspecified product