CspCBS132003 Chaetothyriales sp. CBS 132003

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, QRBJ01000036:202125-213644

MATPredictFungiDBCOX13 (flanking_conserved) QRBJ01000036:202125-202659 - identity 76.9COX13APN2 (flanking_conserved) QRBJ01000036:202991-205071 + identity 86.4APN2MAT1-2-1 (core_MAT) QRBJ01000036:206437-207639 - identity 61.7MAT1-2-1SLA2 (flanking_conserved) QRBJ01000036:210409-213644 + identity 80.9SLA2DV737_g3837 198933-201227 +: Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:A0A3M7MVC2]DV737_g3837DV737_g3838 202125-202659 -: Cytochrome c oxidase polypeptide VIa [Source:UniProtKB/TrEMBL;Acc:A0A3M7MUK3]DV737_g3838DV737_g3839 202991-205071 +: Endonuclease/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MW12]DV737_g3839DV737_g3840 206437-207639 -: HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MWV0]DV737_g3840DV737_g3841 210409-213644 +: I/LWEQ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MVB4]DV737_g3841DV737_g3842 214547-218111 +: SMP-LTD domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MXD8]DV737_g3842DV737_g3843 218202-223287 -: DNA polymerase [Source:UniProtKB/TrEMBL;Acc:A0A3M7MVU8]DV737_g3843198 kb200 kb202 kb204 kb206 kb208 kb210 kb212 kb214 kb216 kb218 kbQRBJ01000036
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved202125-202659 -annotatedDV737_g3838Cytochrome c oxidase polypeptide VIa [Source:UniProtKB/TrEMBL;Acc:A0A3M7MUK3]DV737_g3838 covers 100% of it on the same strand
APN2flanking_conserved202991-205071 +annotatedDV737_g3839Endonuclease/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MW12]DV737_g3839 covers 100% of it on the same strand
MAT1-2-1core_MAT206437-207639 -annotatedDV737_g3840HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MWV0]DV737_g3840 covers 100% of it on the same strand
SLA2flanking_conserved210409-213644 +annotatedDV737_g3841I/LWEQ domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A3M7MVB4]DV737_g3841 covers 100% of it on the same strand