CgraminicolaM1-001 Colletotrichum graminicola M1.001

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, GG697345:256537-273073

MATPredictFungiDBCOX13 (flanking_conserved) GG697345:256537-257378 - identity 69.8COX13APN2 (flanking_conserved) GG697345:258012-260302 + identity 84.1APN2MAT1-2-1 (core_MAT) GG697345:260650-261489 - identity 51.3MAT1-2-1SLA2 (flanking_conserved) GG697345:269590-273073 - identity 82.9SLA2GLRG_04639 252053-252958 +: CIA30 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF57]GLRG_04639GLRG_04640 253788-256269 +: Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:E3QF58]GLRG_04640GLRG_04641 256537-257378 -: Cytochrome c oxidase subunit VIa [Source:UniProtKB/TrEMBL;Acc:E3QF59]GLRG_04641GLRG_04642 258012-260302 +: Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF60]GLRG_04642GLRG_04643 260650-261489 -: HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF61]GLRG_04643GLRG_04644 269590-273073 -: ANTH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF62]GLRG_04644GLRG_04645 274535-275214 -: Ribosomal protein L21e [Source:UniProtKB/TrEMBL;Acc:E3QF63]GLRG_04645GLRG_04646 275580-276372 +: S4 RNA-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF64]GLRG_04646GLRG_04647 276662-278053 -: Pre-mRNA-splicing factor SLU7 [Source:UniProtKB/TrEMBL;Acc:E3QF65]GLRG_04647252 kb256 kb260 kb264 kb268 kb272 kb276 kbGG697345
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved256537-257378 -annotatedGLRG_04641Cytochrome c oxidase subunit VIa [Source:UniProtKB/TrEMBL;Acc:E3QF59]GLRG_04641 covers 100% of it on the same strand
APN2flanking_conserved258012-260302 +annotatedGLRG_04642Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF60]GLRG_04642 covers 100% of it on the same strand
MAT1-2-1core_MAT260650-261489 -annotatedGLRG_04643HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF61]GLRG_04643 covers 100% of it on the same strand
SLA2flanking_conserved269590-273073 -annotatedGLRG_04644ANTH domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QF62]GLRG_04644 covers 100% of it on the same strand