CduobushaemulonisB09383 Candida duobushaemulonis strain B09383

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: alpha Ascomycota:MTL, confidence high, PKFP01000003:1474613-1483311

MATPredictFungiDBOBP1 (flanking_variable) PKFP01000003:1474613-1475803 + identity 84.4OBP1PIK1 (flanking_variable) PKFP01000003:1476030-1478828 + identity 79.7PIK1MTLalpha1 (core_MAT) PKFP01000003:1478982-1479416 + identity 56.55MTLalpha1PAP1 (flanking_variable) PKFP01000003:1479443-1483311 - identity 87.9PAP1CXQ87_003535 1469144-1471095 -: hypothetical proteinCXQ87_003535CXQ87_003536 1472460-1473941 +: hypothetical proteinCXQ87_003536CXQ87_003537 1473976-1474278 -: hypothetical proteinCXQ87_003537CXQ87_003538 1474613-1475803 +: hypothetical proteinCXQ87_003538CXQ87_003539 1476030-1478828 +: hypothetical proteinCXQ87_003539CXQ87_003540 1479443-1483311 -: Poly(A) polymerase PAPalphaCXQ87_003540CXQ87_003541 1484185-1486638 +: hypothetical proteinCXQ87_003541CXQ87_003542 1487534-1489246 +: hypothetical proteinCXQ87_0035421470 kb1472 kb1474 kb1476 kb1478 kb1480 kb1482 kb1484 kb1486 kb1488 kbPKFP01000003
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
OBP1flanking_variable1474613-1475803 +annotatedCXQ87_003538hypothetical proteinCXQ87_003538 covers 100% of it on the same strand
PIK1flanking_variable1476030-1478828 +annotatedCXQ87_003539hypothetical proteinCXQ87_003539 covers 100% of it on the same strand
MTLalpha1core_MAT1478982-1479416 +novel—no FungiDB gene overlaps this MATPredict gene
PAP1flanking_variable1479443-1483311 -annotatedCXQ87_003540Poly(A) polymerase PAPalphaCXQ87_003540 covers 100% of it on the same strand