Cauris6684 Candida auris strain 6684

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MTL_0: A Ascomycota:MTL, confidence high, LGST01000043:172813-180175

MATPredictFungiDBPAP1 (flanking_variable) LGST01000043:172813-174447 - identity 100.0PAP1OBP1 (flanking_variable) LGST01000043:174674-175963 + identity 100.0OBP1PIK1 (flanking_variable) LGST01000043:176416-179253 + identity 100.0PIK1MTLA2 (core_MAT) LGST01000043:179339-179952 + identity 98.68MTLA2MTLA1 (core_MAT) LGST01000043:180026-180175 + identity 95.7MTLA1QG37_06420 168813-170114 +: unspecified productQG37_06420QG37_06421 171289-172770 +: unspecified productQG37_06421QG37_06422 172813-174447 -: pap1QG37_06422QG37_06423 174674-175963 +: obp1QG37_06423QG37_06424 176416-179253 +: pik1QG37_06424QG37_06425 180026-180175 +: unspecified productQG37_06425QG37_06426 180602-182989 -: unspecified productQG37_06426QG37_06427 183799-186234 +: unspecified productQG37_06427168 kb170 kb172 kb174 kb176 kb178 kb180 kb182 kb184 kbLGST01000043
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
PAP1flanking_variable172813-174447 -annotatedQG37_06422pap1QG37_06422 covers 100% of it on the same strand
OBP1flanking_variable174674-175963 +annotatedQG37_06423obp1QG37_06423 covers 100% of it on the same strand
PIK1flanking_variable176416-179253 +annotatedQG37_06424pik1QG37_06424 covers 100% of it on the same strand
MTLA2core_MAT179339-179952 +novel—no FungiDB gene overlaps this MATPredict gene
MTLA1core_MAT180026-180175 +annotatedQG37_06425unspecified productQG37_06425 covers 100% of it on the same strand