BgraministriticaleTHUN-12 Blumeria graminis f. sp. triticale THUN-12

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence medium, LR898468:6827332-6857013

MATPredictFungiDBSLA2 (flanking_conserved) LR898468:6827332-6830695 + identity 82.9SLA2MAT1-1-1 (core_MAT) LR898468:6831308-6831691 + identity 40.48MAT1-1-1MAT1-1-3 (core_MAT) LR898468:6856477-6856764 + identity 25.0MAT1-1-3MAT1-2-1 (core_MAT) LR898468:6856705-6856839 + identity 37.778MAT1-2-1BGTH12_LOCUS270 6827332-6830695 +: CAD6498912.1BGTH12_LOCUS2706824 kb6828 kb6832 kb6836 kb6840 kb6844 kb6848 kb6852 kb6856 kb6860 kbLR898468
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved6827332-6830695 +annotatedBGTH12_LOCUS270CAD6498912.1BGTH12_LOCUS270 covers 100% of it on the same strand
MAT1-1-1core_MAT6831308-6831691 +novel—no FungiDB gene overlaps this MATPredict gene
MAT1-1-3core_MAT6856477-6856764 +novel—no FungiDB gene overlaps this MATPredict gene
MAT1-2-1core_MAT6856705-6856839 +novel—no FungiDB gene overlaps this MATPredict gene