BdermatitidisATCC26199 Blastomyces dermatitidis ATCC 26199

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, GL538369:360953-371764

MATPredictFungiDBCIMG_00407 (core_MAT) GL538369:360953-361560 - identity 40.62CIMG_00407MAT1-2-4 (core_MAT) GL538369:361069-361551 - identity 25.466MAT1-2-4MAT1-2-1 (core_MAT) GL538369:362399-363540 + identity 52.4MAT1-2-1MAT1-1-4 (core_MAT) GL538369:364714-365415 - identity 40.2MAT1-1-4COX13 (flanking_conserved) GL538369:368201-369124 - identity 80.4COX13APN2 (flanking_conserved) GL538369:369501-371764 + identity 71.1APN2BDFG_01907 359953-364238 +: HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:T5BTH5]BDFG_01907BDFG_01908 359956-362059 -: hypothetical protein, variantBDFG_01908BDFG_01909 363938-365554 -: hypothetical protein, variant 2BDFG_01909BDFG_01910 366019-367813 -: unspecified productBDFG_01910BDFG_01911 368201-369124 -: cytochrome c oxidase subunit 6aBDFG_01911BDFG_01912 369350-373079 +: AP endonuclease 2BDFG_01912BDFG_01913 373941-379358 +: Mediator complex subunit 12 [Source:UniProtKB/TrEMBL;Acc:T5C559]BDFG_01913356 kb358 kb360 kb362 kb364 kb366 kb368 kb370 kb372 kb374 kb376 kbGL538369
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
CIMG_00407core_MAT360953-361560 -partialBDFG_01907HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:T5BTH5]BDFG_01907 overlaps 100% but on the opposite strand
MAT1-2-4core_MAT361069-361551 -partialBDFG_01907HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:T5BTH5]BDFG_01907 overlaps 100% but on the opposite strand
MAT1-2-1core_MAT362399-363540 +annotatedBDFG_01907HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:T5BTH5]BDFG_01907 covers 100% of it on the same strand
MAT1-1-4core_MAT364714-365415 -annotatedBDFG_01909hypothetical protein, variant 2BDFG_01909 covers 100% of it on the same strand
COX13flanking_conserved368201-369124 -annotatedBDFG_01911cytochrome c oxidase subunit 6aBDFG_01911 covers 100% of it on the same strand
APN2flanking_conserved369501-371764 +annotatedBDFG_01912AP endonuclease 2BDFG_01912 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
BDFG_01910366019-367813 -unspecified product