AsteyniiIBT23096 Aspergillus steynii IBT 23096

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, MSFO01000002:860587-873738

MATPredictFungiDBCOX13 (flanking_conserved) MSFO01000002:860587-861366 - identity 74.5COX13APN2 (flanking_conserved) MSFO01000002:861691-863717 + identity 90.9APN2MAT1-2-1 (core_MAT) MSFO01000002:864704-865711 - identity 58.3MAT1-2-1MAT1-2-4 (core_MAT) MSFO01000002:866222-867123 + identity 45.5MAT1-2-4CIMG_00407 (core_MAT) MSFO01000002:866444-866710 + identity 27.368CIMG_00407SLA2 (flanking_conserved) MSFO01000002:869849-873738 - identity 87.5SLA2P170DRAFT_453296 857523-860381 +: anaphase-promoting complex proteinP170DRAFT_453296P170DRAFT_461837 860490-861435 -: putative cytochrome c oxidase subunit VIaP170DRAFT_461837P170DRAFT_461838 861602-864112 +: DNA lyase Apn2P170DRAFT_461838P170DRAFT_349471 864704-865711 -: mating-type HMG-box protein MAT1-2P170DRAFT_349471P170DRAFT_422662 866222-867123 +: putative mating locus proteinP170DRAFT_422662P170DRAFT_82848 867029-867477 +: hypothetical proteinP170DRAFT_82848P170DRAFT_82841 867342-868179 -: hypothetical proteinP170DRAFT_82841P170DRAFT_376660 869532-873952 -: endocytic adaptor proteinP170DRAFT_376660P170DRAFT_433552 874268-877558 -: hypothetical proteinP170DRAFT_433552P170DRAFT_443835 878217-882466 -: terpenoid synthaseP170DRAFT_443835856 kb858 kb860 kb862 kb864 kb866 kb868 kb870 kb872 kb874 kb876 kb878 kbMSFO01000002
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved860587-861366 -annotatedP170DRAFT_461837putative cytochrome c oxidase subunit VIaP170DRAFT_461837 covers 100% of it on the same strand
APN2flanking_conserved861691-863717 +annotatedP170DRAFT_461838DNA lyase Apn2P170DRAFT_461838 covers 100% of it on the same strand
MAT1-2-1core_MAT864704-865711 -annotatedP170DRAFT_349471mating-type HMG-box protein MAT1-2P170DRAFT_349471 covers 100% of it on the same strand
MAT1-2-4core_MAT866222-867123 +annotatedP170DRAFT_422662putative mating locus proteinP170DRAFT_422662 covers 100% of it on the same strand
CIMG_00407core_MAT866444-866710 +annotatedP170DRAFT_422662putative mating locus proteinP170DRAFT_422662 covers 100% of it on the same strand
SLA2flanking_conserved869849-873738 -annotatedP170DRAFT_376660endocytic adaptor proteinP170DRAFT_376660 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
P170DRAFT_82841867342-868179 -hypothetical protein