AluchuensisIFO4308 Aspergillus luchuensis IFO 4308

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, DF126454:264372-285492

MATPredictFungiDBSLA2 (flanking_conserved) DF126454:264372-268185 + identity 89.5SLA2MAT1-2-4 (core_MAT) DF126454:278919-279413 - identity 43.3MAT1-2-4CIMG_00407 (core_MAT) DF126454:278922-279194 - identity 23.913CIMG_00407MAT1-2-1 (core_MAT) DF126454:279898-281005 + identity 57.0MAT1-2-1APN2 (flanking_conserved) DF126454:282082-284219 - identity 90.9APN2COX13 (flanking_conserved) DF126454:284776-285492 + identity 78.7COX13AKAW_03825 260528-263420 +: PH domain-containing proteinAKAW_03825AKAW_03826 264372-268185 +: cytoskeleton assembly control protein Sla2AKAW_03826AKAW_03827 268572-270209 -: salicylate hydroxylaseAKAW_03827AKAW_03828 270669-272132 -: CAIB/BAIF family enzymeAKAW_03828AKAW_03829 272693-274192 +: aldehyde dehydrogenase family proteinAKAW_03829AKAW_03830 274509-275888 -: hypothetical proteinAKAW_03830AKAW_03831 278919-279413 -: hypothetical proteinAKAW_03831AKAW_03832 279898-281005 +: mating-type HMG-box protein MAT1-2AKAW_03832AKAW_03833 282082-284219 -: DNA lyase Apn2AKAW_03833AKAW_03834 284776-285492 +: cytochrome c oxidase subunit VIaAKAW_03834AKAW_03835 287361-288505 -: anaphase-promoting complex proteinAKAW_03835260 kb264 kb268 kb272 kb276 kb280 kb284 kb288 kbDF126454
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved264372-268185 +annotatedAKAW_03826cytoskeleton assembly control protein Sla2AKAW_03826 covers 100% of it on the same strand
MAT1-2-4core_MAT278919-279413 -annotatedAKAW_03831hypothetical proteinAKAW_03831 covers 100% of it on the same strand
CIMG_00407core_MAT278922-279194 -annotatedAKAW_03831hypothetical proteinAKAW_03831 covers 100% of it on the same strand
MAT1-2-1core_MAT279898-281005 +annotatedAKAW_03832mating-type HMG-box protein MAT1-2AKAW_03832 covers 100% of it on the same strand
APN2flanking_conserved282082-284219 -annotatedAKAW_03833DNA lyase Apn2AKAW_03833 covers 100% of it on the same strand
COX13flanking_conserved284776-285492 +annotatedAKAW_03834cytochrome c oxidase subunit VIaAKAW_03834 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
AKAW_03827268572-270209 -salicylate hydroxylase
AKAW_03828270669-272132 -CAIB/BAIF family enzyme
AKAW_03829272693-274192 +aldehyde dehydrogenase family protein
AKAW_03830274509-275888 -hypothetical protein