AlentulusIFM54703 Aspergillus lentulus strain IFM 54703

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, BCLY01000004:2550877-2563998

MATPredictFungiDBCOX13 (flanking_conserved) BCLY01000004:2550877-2551618 - identity 95.6COX13APN2 (flanking_conserved) BCLY01000004:2551978-2554165 + identity 93.2APN2MAT1-2-1 (core_MAT) BCLY01000004:2555080-2556156 - identity 89.4MAT1-2-1MAT1-2-4 (core_MAT) BCLY01000004:2556672-2557507 + identity 95.53MAT1-2-4CIMG_00407 (core_MAT) BCLY01000004:2557264-2557431 + identity 30.357CIMG_00407SLA2 (flanking_conserved) BCLY01000004:2560094-2563998 - identity 98.1SLA2TMP_alenIFM54703_2167 2545028-2546227 +: complex I intermediate-associated protein 30, mitochondrialTMP_alenIFM54703_2167TMP_alenIFM54703_2168 2546369-2547417 -: phosphoribosylaminoimidazole-succinocarboxamide synthaseTMP_alenIFM54703_2168TMP_alenIFM54703_2169 2547877-2550497 +: Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:A0A0S7DIF6]TMP_alenIFM54703_2169TMP_alenIFM54703_2170 2550877-2551618 -: cytochrome c oxidase subunit 6A, mitochondrialTMP_alenIFM54703_2170TMP_alenIFM54703_2171 2551978-2554165 +: DNA-(apurinic or apyrimidinic site) lyase 2TMP_alenIFM54703_2171TMP_alenIFM54703_2172 2555080-2556156 -: HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A0S7DHI8]TMP_alenIFM54703_2172TMP_alenIFM54703_2173 2560094-2563998 -: endocytosis protein end4TMP_alenIFM54703_2173TMP_alenIFM54703_2174 2564743-2567570 -: SMP-LTD domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A0S7DHH5]TMP_alenIFM54703_21742546 kb2548 kb2550 kb2552 kb2554 kb2556 kb2558 kb2560 kb2562 kb2564 kb2566 kb2568 kbBCLY01000004
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved2550877-2551618 -annotatedTMP_alenIFM54703_2170cytochrome c oxidase subunit 6A, mitochondrialTMP_alenIFM54703_2170 covers 100% of it on the same strand
APN2flanking_conserved2551978-2554165 +annotatedTMP_alenIFM54703_2171DNA-(apurinic or apyrimidinic site) lyase 2TMP_alenIFM54703_2171 covers 100% of it on the same strand
MAT1-2-1core_MAT2555080-2556156 -annotatedTMP_alenIFM54703_2172HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A0S7DHI8]TMP_alenIFM54703_2172 covers 100% of it on the same strand
MAT1-2-4core_MAT2556672-2557507 +novel—no FungiDB gene overlaps this MATPredict gene
CIMG_00407core_MAT2557264-2557431 +novel—no FungiDB gene overlaps this MATPredict gene
SLA2flanking_conserved2560094-2563998 -annotatedTMP_alenIFM54703_2173endocytosis protein end4TMP_alenIFM54703_2173 covers 100% of it on the same strand