AfischeriNRRL181 Aspergillus fischeri NRRL 181

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, DS027689:394534-398923

MATPredictFungiDBAPN2 (flanking_conserved) DS027689:394534-395277 + identity 74.5APN2MAT1-2-1 (core_MAT) DS027689:396204-397280 - identity 79.2MAT1-2-1MAT1-2-4 (core_MAT) DS027689:397799-398923 + identity 86.3MAT1-2-4CIMG_00407 (core_MAT) DS027689:398392-398616 + identity 28.0CIMG_00407NFIA_024380 394534-395277 +: DNA lyase-like protein, putativeNFIA_024380NFIA_024390 396204-397280 -: mating-type protein MAT1-2NFIA_024390NFIA_024400 397799-398923 +: mating locus protein, putativeNFIA_024400390 kb392 kb394 kb396 kb398 kb400 kb402 kbDS027689
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
APN2flanking_conserved394534-395277 +annotatedNFIA_024380DNA lyase-like protein, putativeNFIA_024380 covers 100% of it on the same strand
MAT1-2-1core_MAT396204-397280 -annotatedNFIA_024390mating-type protein MAT1-2NFIA_024390 covers 100% of it on the same strand
MAT1-2-4core_MAT397799-398923 +annotatedNFIA_024400mating locus protein, putativeNFIA_024400 covers 100% of it on the same strand
CIMG_00407core_MAT398392-398616 +annotatedNFIA_024400mating locus protein, putativeNFIA_024400 covers 100% of it on the same strand

Ascomycota_MAT_1: MAT1-1 Ascomycota:MAT, confidence high, DS027690:2661927-2675129

MATPredictFungiDBCOX13 (flanking_conserved) DS027690:2661927-2662667 - identity 94.9COX13APN2 (flanking_conserved) DS027690:2663048-2665215 + identity 93.2APN2MAT1-2-1 (core_MAT) DS027690:2666132-2667149 - identity 84.9MAT1-2-1MAT1-1-1 (core_MAT) DS027690:2667284-2668441 + identity 95.9MAT1-1-1SLA2 (flanking_conserved) DS027690:2670931-2675129 - identity 95.1SLA2NFIA_071040 2656055-2657251 +: complex I intermediate associated protein (Cia30), putativeNFIA_071040NFIA_071050 2657393-2658440 -: phosphoribosyl-aminoimidazole-succinocarboxamide synthaseNFIA_071050NFIA_071060 2659009-2661524 +: anaphase-promoting complex proteinNFIA_071060NFIA_071070 2661927-2662667 -: cytochrome c oxidase subunit VIa, putativeNFIA_071070NFIA_071080 2663048-2665215 +: DNA lyase, putativeNFIA_071080NFIA_071090 2666132-2667149 -: mating-type protein, putativeNFIA_071090NFIA_071100 2667284-2668441 +: mating-type protein MAT alpha 1NFIA_071100NFIA_071110 2670931-2675129 -: cytoskeleton assembly control protein Sla2, putativeNFIA_071110NFIA_071120 2675576-2678402 -: conserved hypothetical proteinNFIA_071120NFIA_071130 2679897-2681330 -: hexaprenyl pyrophosphate synthetase Coq1, putativeNFIA_0711302658 kb2660 kb2662 kb2664 kb2666 kb2668 kb2670 kb2672 kb2674 kb2676 kb2678 kb2680 kbDS027690
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
COX13flanking_conserved2661927-2662667 -annotatedNFIA_071070cytochrome c oxidase subunit VIa, putativeNFIA_071070 covers 100% of it on the same strand
APN2flanking_conserved2663048-2665215 +annotatedNFIA_071080DNA lyase, putativeNFIA_071080 covers 100% of it on the same strand
MAT1-2-1core_MAT2666132-2667149 -annotatedNFIA_071090mating-type protein, putativeNFIA_071090 covers 100% of it on the same strand
MAT1-1-1core_MAT2667284-2668441 +annotatedNFIA_071100mating-type protein MAT alpha 1NFIA_071100 covers 100% of it on the same strand
SLA2flanking_conserved2670931-2675129 -annotatedNFIA_071110cytoskeleton assembly control protein Sla2, putativeNFIA_071110 covers 100% of it on the same strand