AeucalypticolaCBS122712 Aspergillus eucalypticola CBS 122712

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence high, MSFU01000025:284985-305984

MATPredictFungiDBSLA2 (flanking_conserved) MSFU01000025:284985-288791 + identity 88.8SLA2MAT1-2-4 (core_MAT) MSFU01000025:299397-299891 - identity 43.3MAT1-2-4CIMG_00407 (core_MAT) MSFU01000025:299400-299693 - identity 23.232CIMG_00407MAT1-2-1 (core_MAT) MSFU01000025:300377-301483 + identity 57.0MAT1-2-1APN2 (flanking_conserved) MSFU01000025:302569-304707 - identity 90.9APN2COX13 (flanking_conserved) MSFU01000025:305262-305984 + identity 79.4COX13BO83DRAFT_381143 280862-284388 +: PH domain-containing proteinBO83DRAFT_381143BO83DRAFT_381144 284630-289010 +: cytoskeleton assembly control protein Sla2BO83DRAFT_381144BO83DRAFT_320043 289177-290851 -: salicylate hydroxylaseBO83DRAFT_320043BO83DRAFT_367338 291313-292776 -: CAIB/BAIF family enzymeBO83DRAFT_367338BO83DRAFT_381147 293298-294909 +: aldehyde dehydrogenase family proteinBO83DRAFT_381147BO83DRAFT_410619 295139-296525 -: unspecified productBO83DRAFT_410619BO83DRAFT_320081 299397-299891 -: unspecified productBO83DRAFT_320081BO83DRAFT_452341 300377-301483 +: mating-type HMG-box protein MAT1-2BO83DRAFT_452341BO83DRAFT_440026 302569-304707 -: DNA lyase Apn2BO83DRAFT_440026BO83DRAFT_344412 305262-306324 +: cytochrome c oxidase subunit VIaBO83DRAFT_344412BO83DRAFT_401616 306366-308999 -: anaphase-promoting complex subunit Apc5BO83DRAFT_401616BO83DRAFT_410624 310656-311939 -: nucleotide-diphospho-sugar transferaseBO83DRAFT_410624280 kb284 kb288 kb292 kb296 kb300 kb304 kb308 kbMSFU01000025
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
SLA2flanking_conserved284985-288791 +annotatedBO83DRAFT_381144cytoskeleton assembly control protein Sla2BO83DRAFT_381144 covers 100% of it on the same strand
MAT1-2-4core_MAT299397-299891 -annotatedBO83DRAFT_320081unspecified productBO83DRAFT_320081 covers 100% of it on the same strand
CIMG_00407core_MAT299400-299693 -annotatedBO83DRAFT_320081unspecified productBO83DRAFT_320081 covers 100% of it on the same strand
MAT1-2-1core_MAT300377-301483 +annotatedBO83DRAFT_452341mating-type HMG-box protein MAT1-2BO83DRAFT_452341 covers 100% of it on the same strand
APN2flanking_conserved302569-304707 -annotatedBO83DRAFT_440026DNA lyase Apn2BO83DRAFT_440026 covers 100% of it on the same strand
COX13flanking_conserved305262-305984 +annotatedBO83DRAFT_344412cytochrome c oxidase subunit VIaBO83DRAFT_344412 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
BO83DRAFT_320043289177-290851 -salicylate hydroxylase
BO83DRAFT_367338291313-292776 -CAIB/BAIF family enzyme
BO83DRAFT_381147293298-294909 +aldehyde dehydrogenase family protein
BO83DRAFT_410619295139-296525 -unspecified product