AapisARSEF7405 Ascosphaera apis ARSEF 7405

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-2 Ascomycota:MAT, confidence medium, AZGZ01000031:2862-12584

MATPredictFungiDBAPN2 (flanking_conserved) AZGZ01000031:2862-4801 + identity 84.1APN2MAT1-2-1 (core_MAT) AZGZ01000031:5242-6339 - identity 55.6MAT1-2-1CIMG_00407 (core_MAT) AZGZ01000031:7102-7512 + identity 25.714CIMG_00407MAT1-2-4 (core_MAT) AZGZ01000031:7159-7512 + identity 26.23MAT1-2-4SLA2 (flanking_conserved) AZGZ01000031:8501-12584 - identity 91.4SLA2AAP_05387 441-1734 -: Mitochondrial thiamine pyrophosphate carrier 1 [Source:UniProtKB/TrEMBL;Acc:A0A162I268]AAP_05387AAP_05388 2862-4801 +: Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A167VL01]AAP_05388AAP_05389 5242-6339 -: HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A167VL34]AAP_05389AAP_05390 6814-7728 +: unspecified productAAP_05390AAP_05391 8501-12584 -: Cytoskeleton assembly control protein [Source:UniProtKB/TrEMBL;Acc:A0A167VL49]AAP_05391AAP_05392 14296-15595 -: Ribosomal protein L37e [Source:UniProtKB/TrEMBL;Acc:A0A167VL57]AAP_05392AAP_05393 15860-21058 +: DNA polymerase [Source:UniProtKB/TrEMBL;Acc:A0A167VL69]AAP_05393-2 kb0 kb2 kb4 kb6 kb8 kb10 kb12 kb14 kb16 kbAZGZ01000031
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
APN2flanking_conserved2862-4801 +annotatedAAP_05388Endo/exonuclease/phosphatase domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A167VL01]AAP_05388 covers 100% of it on the same strand
MAT1-2-1core_MAT5242-6339 -annotatedAAP_05389HMG box domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A167VL34]AAP_05389 covers 100% of it on the same strand
CIMG_00407core_MAT7102-7512 +annotatedAAP_05390unspecified productAAP_05390 covers 100% of it on the same strand
MAT1-2-4core_MAT7159-7512 +annotatedAAP_05390unspecified productAAP_05390 covers 100% of it on the same strand
SLA2flanking_conserved8501-12584 -annotatedAAP_05391Cytoskeleton assembly control protein [Source:UniProtKB/TrEMBL;Acc:A0A167VL49]AAP_05391 covers 100% of it on the same strand