AalternataSRC1lrK2f Alternaria alternata SRC1lrK2f

Release tableMATPredict reportGFF3

Top track: the genes MATPredict modelled at the MAT locus. Bottom track: every FungiDB gene in the same region (locus span, shaded, plus 5 kb each side). A FungiDB gene is green when a MATPredict gene overlaps it on the same strand. Hover a gene for its coordinates and product; FungiDB gene IDs link to fungidb.org.

core MAT geneflanking conserved geneotherFungiDB gene matched by MATPredict

Ascomycota_MAT_0: MAT1-1 Ascomycota:MAT, confidence high, KV441469:282551-288669

MATPredictFungiDBMAT1-1-1 (core_MAT) KV441469:282551-283767 + identity 57.5MAT1-1-1APN2 (flanking_conserved) KV441469:285775-287729 - identity 86.4APN2COX13 (flanking_conserved) KV441469:288032-288669 + identity 51.3COX13CC77DRAFT_1055875 276955-278086 -: NIPSNAP-domain-containing proteinCC77DRAFT_1055875CC77DRAFT_1015125 278416-281090 -: RhoGAP-domain-containing proteinCC77DRAFT_1015125CC77DRAFT_1015126 281147-282488 +: pyridoxamine phosphate oxidase-like proteinCC77DRAFT_1015126CC77DRAFT_5302 282242-284080 +: mating type protein MAT1-1-1CC77DRAFT_5302CC77DRAFT_951750 285467-287849 -: DNase I-like proteinCC77DRAFT_951750CC77DRAFT_977938 288032-288856 +: COX6A-domain-containing proteinCC77DRAFT_977938CC77DRAFT_1015129 288667-291583 -: Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:A0A177E1A8]CC77DRAFT_1015129CC77DRAFT_1089740 291771-292746 -: complex I intermediate-associated protein 30, mitochondrial precursorCC77DRAFT_1089740CC77DRAFT_1089741 292727-294492 +: mitochondrial carrierCC77DRAFT_1089741278 kb280 kb282 kb284 kb286 kb288 kb290 kb292 kbKV441469
MATPredict geneRoleCoordinatesVerdictFungiDB geneFungiDB productWhy
MAT1-1-1core_MAT282551-283767 +annotatedCC77DRAFT_5302mating type protein MAT1-1-1CC77DRAFT_5302 covers 100% of it on the same strand
APN2flanking_conserved285775-287729 -annotatedCC77DRAFT_951750DNase I-like proteinCC77DRAFT_951750 covers 100% of it on the same strand
COX13flanking_conserved288032-288669 +annotatedCC77DRAFT_977938COX6A-domain-containing proteinCC77DRAFT_977938 covers 100% of it on the same strand

FungiDB genes inside the locus span that MATPredict did not model:

FungiDB geneCoordinatesProduct
CC77DRAFT_1015129288667-291583 -Anaphase-promoting complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:A0A177E1A8]